Lactobacillus johnsonii DPC 6026: LJP_1269c
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Entry
LJP_1269c CDS
T01960
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ljh
Lactobacillus johnsonii DPC 6026
Pathway
ljh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ljh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LJP_1269c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ljh03400
]
LJP_1269c
Enzymes [BR:
ljh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LJP_1269c
DNA repair and recombination proteins [BR:
ljh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LJP_1269c
Prokaryotic type
LJP_1269c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEB93591
LinkDB
All DBs
Position
complement(1361411..1362106)
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AA seq
231 aa
AA seq
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MKKLIGNDWDEVLAPAFESEKYQELRDFLKEEYQTKQIFPDMYHIFTAFKLTSFADTKVV
ILGQDPYHNPGQATGMSFSVNPGVPLPPSLKNIYKELYDDVGAVPVNHGYLKKWADQGVL
LLNAVLTVPYGNANGHRGKGWELITDTAIKALSDRGKVVFILWGKFAQNKIPLIDEGKNV
IIKSPHPSPFSADRGFFGSRPFSRCNDALIKFGESPIDWQLPQEVNPADMA
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattaattggaaatgattgggatgaagttttagcaccagcttttgaaagtgaa
aagtatcaagaattacgtgattttttaaaggaagaatatcaaacgaaacagatatttccc
gatatgtatcatatttttactgcttttaaattaacaagttttgcagatacgaaagttgta
attttaggacaagatccatatcataatccaggtcaagctactgggatgagctttagtgtt
aatccaggagttccattgcctccatctttaaaaaatatttataaagaactatatgatgat
gtgggtgcagtcccagtaaatcatggctaccttaaaaaatgggcagatcaaggagtatta
ctcttaaatgcagttttgactgtaccatatggaaatgctaatgggcaccgaggtaaaggc
tgggaactaattacggacacagctattaaggcgctaagtgaccgaggaaaagttgtcttt
attttgtggggaaaatttgcacaaaataaaattcctttaattgatgagggaaagaatgta
attatcaaatctccccaccctagtcctttttcagcagatcgtggctttttcggttcacgt
ccgttttctagatgtaatgatgctttgattaaatttggtgaaagtccaattgattggcaa
ttaccacaagaagtaaacccagcagatatggcatag
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