Lactobacillus johnsonii DPC 6026: LJP_1420c
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Entry
LJP_1420c CDS
T01960
Name
(GenBank) penicillin-binding protein 1F
KO
K12555
penicillin-binding protein 2A [EC:
2.4.99.28
3.4.16.4
]
Organism
ljh
Lactobacillus johnsonii DPC 6026
Pathway
ljh00550
Peptidoglycan biosynthesis
ljh01100
Metabolic pathways
ljh01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ljh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LJP_1420c
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LJP_1420c
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ljh01003
]
LJP_1420c
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ljh01011
]
LJP_1420c
Enzymes [BR:
ljh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
LJP_1420c
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LJP_1420c
Glycosyltransferases [BR:
ljh01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
LJP_1420c
Peptidoglycan biosynthesis and degradation proteins [BR:
ljh01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
LJP_1420c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AEB93742
LinkDB
All DBs
Position
complement(1519111..1521168)
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AA seq
685 aa
AA seq
DB search
MHSQNHEFWHRVHLAIKNFNHRFQIWRWLILILLSCCLFVCTYYTVKVKTSNISNMKAAL
STTTTIYDNKNQKAGSLYSQKGSFVELNQISPYIQDAVIATEDRTFYKNPGFSVKGMARA
AISSLIHRGIVGGGSTLTQQLAKNALLTQKQTFSRKLEELFFAIEINRVYSKKDILTMYL
NNAYFGNGVWGVQDAARRYFGKNASDVTVGEAATIAGMLRSPSYYNPIDHMDNAISRRNV
VLGLMADTGKISKTQADNAKKTTLTLDDTFSQEDGYRYPYFFDAVVDEAIDRYGLKEEDV
MNKGLKIYTTLDTGYQTALQDSFEESWNFPPNASDGTKVQGASVAMDPKTGAVRAMVGGR
GQHVFRGYNRATQMKRQPGSTMKPLAVYSPALQSGYHYDSELSNKLQKFGKNGYEPKNVD
NQYSNKIPMYEALAQSKNVPAVWLLDKIGVSKGVQSVENFGIHVNKSDQNLALALGGLST
GVSPLQMARAYSAFANEGNLPNQSYCITKITDASGNVIAQNKNPGNHRIISTNTAKEMTS
MLLGVFTSGTGRSAQPSSFRVAGKTGSTEVPDSYGFGTKDQWIVGYTPDVVLSTWVGFDK
TDQEHYMEGISETGITHLYKSELERLLPYTSQTQFKEKSAQQIAKDTGANSDWLGNLGQQ
VQKGINDTGSKFNEWYNNLKGLLGR
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcattcccaaaatcatgagttttggcatcgcgttcatttagcgattaaaaacttcaac
catcgttttcaaatttggcgttggttaattttgatattactgtcctgttgtttgttcgtt
tgtacatattataccgttaaggtaaaaacttcgaacatctctaatatgaaggcagcactt
tctacgacaactacaatttatgataataaaaatcagaaggccggatccctatactcacaa
aagggatcttttgtggaactgaaccagatatcgccttatattcaagatgctgtcatcgct
acagaagacaggactttttataaaaatccaggttttagtgtaaaagggatggcaagagct
gccatcagtagtttaatccaccgaggtattgttggtggtggatctaccttaacacagcaa
ttagccaagaatgcattattgacgcaaaagcagactttttctagaaaactagaagaactc
ttttttgcgatcgaaattaatcgtgtctattctaaaaaagacatcttaacaatgtatctg
aacaatgcttattttggtaacggtgtttggggtgttcaagatgcagcacgacgatacttt
ggaaaaaatgctagcgatgtaacagtaggggaagctgctacaattgcaggtatgcttcgt
agtccaagctactataatccaattgatcatatggataatgcaatttcaagacgaaacgtt
gttttaggtttgatggctgatacaggcaagatttctaagacacaagctgataatgctaag
aagactacgcttacccttgatgatacattttctcaagaagatggctatcgctacccttac
ttctttgatgccgttgttgatgaagcaatagatcggtatggcttaaaagaagaagacgta
atgaacaaaggattgaagatctatactacgctagacactggctatcaaactgccttgcaa
gatagttttgaagaaagctggaatttcccaccaaatgccagtgatggtactaaagtgcaa
ggagctagtgttgcaatggatccaaagactggagctgttcgagcaatggttggtggtaga
ggacaacatgtctttcgcggctataaccgtgctacccaaatgaaacgtcagccgggttcg
accatgaagcctctggctgtctattcgccagccttgcagagcggctatcattatgattct
gaactttctaataaactgcaaaaatttggaaaaaacggctatgaaccgaagaatgttgat
aatcaatactcaaataaaattccaatgtatgaggccctagctcaaagtaaaaatgtacca
gcagtatggcttttagataagattggtgtcagcaagggtgttcaatcagtggagaacttt
ggtattcacgttaataagagtgatcaaaacttggcattagctttaggtggactttcaacg
ggtgtttcaccactccagatggcgcgagcttatagtgcttttgctaacgaaggtaattta
ccaaatcaatcctactgtattactaaaatcactgatgctagcggaaatgttattgctcaa
aacaagaatcctggtaatcaccgaattatttcaactaatactgctaaagaaatgacatca
atgcttttaggcgtctttacttcaggaaccggtagatctgctcaaccatcaagttttaga
gtagcaggtaagactggttcaactgaggtaccagatagttatggatttggtacaaaagac
caatggatcgttggttatactccagatgttgtcttatcaacttgggtaggttttgataag
actgatcaagaacattatatggagggtatttcagaaactggaattactcacttgtataaa
tctgaattggagcggctacttccatatacttctcaaacgcaatttaaggaaaagagcgct
caacagatagcaaaagatacaggtgcaaattcagactggcttggtaatttgggtcaacaa
gtacaaaaaggaatcaatgatactgggtctaagttcaacgaatggtataataatcttaaa
ggacttttaggtcgttaa
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