Lactobacillus johnsonii DPC 6026: LJP_1443
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Entry
LJP_1443 CDS
T01960
Name
(GenBank) Site-specific recombinase, DNA invertase Pin related protein
KO
K06400
site-specific DNA recombinase
Organism
ljh
Lactobacillus johnsonii DPC 6026
Brite
KEGG Orthology (KO) [BR:
ljh00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99978 Cell growth
LJP_1443
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Gene cluster
GFIT
Motif
Pfam:
Resolvase
Recombinase
Zn_ribbon_recom
YbjQ_1
DUF6277
TSNAXIP1_N
IF-2B
Motif
Other DBs
NCBI-ProteinID:
AEB93765
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Position
1548429..1550006
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AA seq
525 aa
AA seq
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MGKVRIIPAHQQKGNSVQPQKNRLPFEQLRVAAYCRVSTDYDEQASSYETQVAHYKELIQ
KEPTWEFAGIYADDGISGTNTKKREQFNQMIAACKAGKIDLIVTKSISRFARNTIDCLKY
IRDLKAINVAIFFEKENINTMDAKGEVLITIMASLAQQESESLSQNVKMGIQYRYQQGKV
FVNHNHFLGYTKDDQGNLVIEPEEAKVIKRIFYSYLNGMSMKQIADSLKADGILTGGKTK
NWQSSGVSKILKNEKYMGDALLQKTYTIDFLSKKRVKNNGIMPQYYVENDHPAIIPKPVF
MQVQQLIKQRQNGITTKNGKHRRLNGKYCFSQIVFCGKCGDIFQRNMWYRPEKVAVWRCA
SRIKRSKTGRRCMIRNVKEPLLKEATVEAFNQLIEGHELAGKQIKANIMKVIKNSKGPTL
DQLDKQLEEAQMQLIQAANQHQNCDVLTQQIMDLRKQRAKVQSREAKQQAKLHSIDEINK
LIEFHKYGLVDFDEGLVRRLVEKITIFKRYMEFKFKDGEVIRINK
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
ttgggtaaagtgaggattatccccgctcatcagcaaaaaggcaatagcgttcaaccgcaa
aaaaatagactaccatttgaacagctccgagtggcggcctactgccgggtttcgactgat
tatgatgaacaagctagctcctacgaaactcaggtggctcactataaagaattaattcaa
aaagaaccaacctgggagtttgcaggtatctacgccgatgatggaatctcagggactaac
actaagaagcgggaacaatttaaccagatgattgcagcctgcaaagccggtaaaattgac
ctgatcgtcactaaatcaattagccggtttgctcgaaataccattgattgtttgaagtat
atccgagacttaaaagccatcaatgtggccatcttctttgaaaaagagaacatcaacacc
atggatgccaaaggtgaggtgctgattaccatcatggcttctcttgcccagcaagaaagt
gaatccctatcgcaaaacgttaaaatgggaatccagtaccgctaccaacaaggtaaggtc
ttcgtcaaccataatcattttctcggctataccaaggacgatcagggtaatctggtaatt
gaaccggaagaagctaaagtcatcaaacggatcttctatagttatctaaacgggatgagt
atgaagcaaatcgcggactcactcaaagctgatggtattttaactggtggtaaaacaaag
aactggcaatccagcggtgtttcaaaaattctaaagaatgagaaatacatgggtgatgct
ctattgcaaaagacttacactattgattttctgagcaagaaacgcgtcaagaataacggt
atcatgcctcaatactatgtagaaaacgaccatcccgcgattattcccaagccggtattc
atgcaagtccagcagctcatcaaacaacgacaaaacgggatcactactaagaatggtaag
caccggcgacttaacggtaaatattgtttctcccaaatagtcttttgtggaaaatgcggc
gacatttttcaacggaatatgtggtaccgaccagaaaaggtagcagtctggcgttgtgct
agtcgaataaagcgaagcaaaaccggaaggcgatgcatgattagaaatgtcaaagaacca
ctgctaaaggaagccaccgtagaagcctttaaccagctcattgaaggacacgagttagct
ggcaaacagatcaaggctaacattatgaaggtcattaaaaattctaaaggacctaccctt
gatcaactcgataaacaactggaagaggcccaaatgcagctaatccaggccgccaaccag
catcaaaattgcgatgtcctcacccagcaaatcatggatttacgaaagcaaagagcaaag
gtgcaaagccgtgaagctaaacagcaagcaaaactacacagcattgatgaaatcaacaaa
ctgatcgaattccacaaatatggcttagtggactttgatgagggtttggttcgtcgccta
gtagaaaaaatcaccatcttcaaacgctacatggagttcaagttcaaagatggtgaagtt
atcagaattaacaaatga
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