Lactobacillus johnsonii DPC 6026: LJP_1471c
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Entry
LJP_1471c CDS
T01960
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ljh
Lactobacillus johnsonii DPC 6026
Pathway
ljh03420
Nucleotide excision repair
ljh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ljh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LJP_1471c
03430 Mismatch repair
LJP_1471c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ljh03400
]
LJP_1471c
Enzymes [BR:
ljh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LJP_1471c
DNA repair and recombination proteins [BR:
ljh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LJP_1471c
MMR (mismatch excision repair)
Other MMR factors
LJP_1471c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AEB93791
LinkDB
All DBs
Position
complement(1585837..1588083)
Genome browser
AA seq
748 aa
AA seq
DB search
MSEETILAGLNPQQKKAVQCTEGPLLVVAGAGSGKTSVLTRRIAYLIEEKGVAPWNVLAI
TFTNKAATEMKERVQKLLGPAADSVWMSTFHALCVRILRRDAEKIGYSNNFSIADSAEQL
TLIKRIEKDLNINPKMYDPKAILGAISNGKNDLLTPKDFKDQAASPFEKVTAQVYSEYQH
RLKRDQIMDFDDLIMQTLVLFKKDQETLHYYQNKFRYILVDEYQDTNEAQYQLCVALAAQ
YKNICVVGDADQSIYGWRGANMENILNFEHDYQDDEVTTIKLEQNYRSTGHILDAANSVI
KNNLKRKPKKLWTDKGAGDKIDYYRAQSGNDEALFIISKIKEEIKEHQRDYKDFAVLYRT
NAQSRNVEEALVKANIPYRIVGGHKFYDRKEIKDILAYLKVVANPADSMSFNRIINVPKR
GLGPTTMAKFNGFANDNDFTVEETFKNLSLAPITGRPARTLATFGTALKDAIEYSKTHGV
TGLTEKILADFGYKEALENEHTIEADTRLENLNEFLTVTKRFDDNYEPEDEDSTALGDFL
SEISLLSDQDDLENQDNQVALMTLHAAKGLEFPVVFLVGMEEGLFPLSRAAEDPSELEEE
RRLAYVGITRAEKKLYITNAFSRMMYGRPQRNQPSRFIDEIEDKDLEFVNPMPSNSVISV
PFDIRRKEQAKSHAYFPKITIEEAKKATGAVGAEKKSWNVGDQVTHKSWGKGVVVKVNGT
GEDMELDIAFASQGVKRLLAAFAPIKKI
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaaacaattcttgcaggattaaatcctcagcagaaaaaagctgtgcagtgt
actgaaggtccacttttagtagttgctggagctggtagtggaaaaacatcagttttaaca
cgtcgaattgcctatttaattgaagaaaagggcgttgcgccatggaatgttttagccatt
acttttactaataaggctgcaactgaaatgaaagaacgtgtccaaaagttattaggacca
gcagctgacagtgtttggatgtcaacttttcatgcgttatgtgttcgtattttgcgtcga
gacgcagaaaaaattggctactccaataatttttcaattgctgattctgcagaacaattg
acactaattaaacgaattgaaaaggatcttaatattaatcctaaaatgtatgatccaaaa
gcaattttaggtgctatttcgaatggaaaaaatgacttacttactccaaaagactttaag
gatcaagcagctagtccgtttgaaaaagtaacagcgcaagtatatagcgaatatcaacat
cgcttaaagcgtgatcaaattatggattttgatgatttaattatgcaaactctagtctta
tttaagaaggaccaagaaactttgcattattatcaaaataaattccgctatattttagtg
gatgagtaccaggatacaaatgaagcacagtatcaactttgtgttgcgctagctgctcaa
tataaaaatatttgtgttgttggggatgcagatcagtctatctatggttggcgcggagct
aacatggaaaatattcttaattttgaacatgactatcaggatgatgaagttactactatt
aaattggagcaaaattaccgctctactggccatattcttgatgcagctaactcagtaatt
aaaaataatctgaaacgtaaacctaagaaactttggactgataaaggtgctggcgataaa
atcgattattaccgtgctcaaagtggaaatgatgaagcactgtttatcatttcaaagatt
aaagaagaaataaaagaacatcaaagagactacaaggattttgctgttctttatcggacc
aatgctcaatcacgtaatgtcgaagaagcgctagttaaagctaatattccgtatcggatt
gttggtgggcataagttctacgatcgaaaagaaattaaagatattttggcttatttaaaa
gttgtcgcaaatcctgcggattcaatgagttttaatcgaattattaatgtaccaaaacgt
ggtttgggtccaactacgatggctaagtttaacggttttgctaatgataatgactttaca
gtagaagagacttttaagaatttgagcttagcaccaattacgggtcgcccagctagaacc
ttagctacttttggaacggccttaaaagatgcaatcgaatatagtaagacgcatggtgta
acagggttaacggaaaaaatattagcggatttcggctataaagaagctttagaaaatgaa
cacacaattgaagcagatactagattagaaaacttaaatgaatttctgactgttactaag
cgttttgatgataattatgagcccgaagatgaagattcaacagctttaggtgattttctt
tcagagatctcattattaagtgatcaagatgatttagaaaatcaagataaccaagttgca
ttgatgactcttcatgctgctaagggactagagtttccagtggtcttcttagtcggaatg
gaagaaggacttttcccactttcaagagcagcagaagatccaagtgaacttgaagaagaa
cgtcgtttggcctatgtcggaattacgcgtgctgagaagaaactctacataactaatgct
ttttctagaatgatgtatggccgtccgcaacgtaatcaaccatcacgctttattgatgag
attgaagataaggatttagaatttgttaatccaatgccatctaattctgtcatatctgtt
ccttttgatattaggagaaaggaacaagctaagtctcatgcttactttccaaagattaca
attgaggaggctaagaaagcaactggtgcagttggagctgagaaaaagtcctggaatgtt
ggtgatcaagttacacataagtcatggggaaaaggcgttgtagttaaagtcaacggtact
ggagaagatatggaattagatattgcttttgcaagtcaaggagtgaaacgccttttagct
gcctttgcaccgattaaaaagatataa
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