Lactobacillus johnsonii DPC 6026: LJP_1592c
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Entry
LJP_1592c CDS
T01960
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ljh
Lactobacillus johnsonii DPC 6026
Pathway
ljh03420
Nucleotide excision repair
ljh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ljh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LJP_1592c
03430 Mismatch repair
LJP_1592c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ljh03400
]
LJP_1592c
Enzymes [BR:
ljh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LJP_1592c
DNA repair and recombination proteins [BR:
ljh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LJP_1592c
MMR (mismatch excision repair)
Other MMR factors
LJP_1592c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C_2
UvrD-helicase
AAA_19
UvrD_C
SLFN-g3_helicase
AAA_30
TMV_coat
DEAD
Catalase_C
AAA_16
NACHT
DUF6852
Motif
Other DBs
NCBI-ProteinID:
AEB93908
LinkDB
All DBs
Position
complement(1731699..1734017)
Genome browser
AA seq
772 aa
AA seq
DB search
MLEIGDVILVKETEQQKEQKHLDDVLGLIKKKEKELDHSIEHAQNEAQNINSHFFDDVKL
DYDGYSTSMDTALSIHQQQQMLAERQNAWQHSAKQLSTLQRLEKKPYFARVDFQEPNEEP
ETIYIGLGSFADKEDHFLIYDWRAPISSIYYDGKLGKVSYNAPDGVQTVDMTKKRQFLIK
DGKITNMFDTNESIGDQMLLNVLNEKSSTQMKSIVTTIQREQNKIIRNTSADLLFVQGAA
GSGKTSAIMQRVAYLLYRYRGNLTSSDVIMFSPNQLFNDYVKNVLPEMGEQNMVQMTYWQ
FVSRRVPGMNVENLFEQFEDNEQNDKIVNLKNSLQFFNAVTRYAKHLEKNGLVFKNIYFK
SKEKPFFDKEKIKEIYYGFNENYHLRNRIEATKEALINSLNRRIEPETKKAWVDKTIESL
DQEQLNKLYDRPDQEFESSAKEEHFLARKIVINQLKQVSRKICQNRFLNIRAQYLRFLRA
VPKIIDLSKWDITQEEWDAHIENVKGRFKAGRIKMADISPYLYLYDLVTGRRTDYEMRYA
FIDEIQDYTPFQLAYLKYNFPRAKFTMLGDLNQAIFTKDESKTLLSQISKLFDPEKTDVV
QLTKSYRSTEEITNFTKQILRQGEKIEAFDRRGPKPAFYKRDSIEKEYSALEDILAENDE
QKLTTAIITKTLAEAQEVAKVLKERKIKATLIGSANQRLVPGTLVMPSYLAKGLEFDAVV
AWGVSKENYHQLDETQLLYTIASRAMYKLDLIYTGEKSPLFDNLDEKTYVNK
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgctagaaataggtgacgtaattttggtaaaagaaactgaacaacaaaaagaacaaaaa
catttagatgatgttcttggcttaattaaaaagaaagaaaaagagctcgatcattcaatt
gaacatgcacaaaatgaagctcaaaatatcaactcacacttttttgatgatgtgaaatta
gattatgatggctattccacttcaatggatactgctttgtctattcaccagcaacaacaa
atgttagctgaaagacaaaatgcctggcaacattcagctaagcaattatcgaccttgcag
cgtttagaaaagaagccatattttgcaagagttgattttcaagaacctaatgaagaacca
gaaactatttatattggattagggtcttttgcagataaagaagatcattttttaatctat
gattggcgtgccccaatatcatctatttactatgatggaaaattaggaaaagtatcatat
aatgcaccagatggtgtgcaaactgttgatatgactaagaagcgtcaatttttaattaaa
gatggcaagattactaatatgtttgataccaatgaatccattggggatcaaatgctctta
aatgtcttgaatgaaaaatcatctacacagatgaagtcaattgtgactaccattcaacgt
gagcaaaataaaattattagaaatactagtgctgatcttttatttgttcaaggagctgct
ggttcgggtaagacatctgccattatgcagcgtgtggcctacttactatatcgctaccgt
ggtaatttgacttctagcgatgttattatgttcagcccaaatcaattatttaatgattat
gttaaaaatgttcttccggaaatgggagaacagaatatggttcaaatgacttactggcag
tttgtttctcgccgtgttcccggaatgaacgttgaaaacttatttgaacaattcgaagat
aatgagcaaaacgataagattgttaacttgaagaattcattgcaattctttaatgcagta
actcgctatgctaaacatcttgaaaagaatggtttggtttttaagaacatttactttaag
agtaaggaaaaaccattttttgataaggaaaagatcaaggaaatttactacggctttaat
gaaaactaccacttaaggaatagaattgaagctacaaaagaagctttgattaatagctta
aaccgcagaattgaacctgaaactaagaaggcatgggttgataaaactattgaatccttg
gatcaagaacaattaaataagctgtatgatcgtccagatcaagaatttgaatctagtgca
aaagaagagcactttttagctcgtaagattgtaattaatcaattaaagcaagttagtcgc
aagatttgtcagaatcgctttttaaatattcgtgcacaatacttacgctttttacgtgcc
gttcctaagataattgacttaagtaaatgggacattactcaagaggagtgggatgctcat
attgaaaatgttaaagggcggtttaaggctggaagaatcaagatggccgatatttctcct
tacctttacctatatgatctagtaactggacgtagaacagattatgaaatgcgctatgcc
tttattgatgaaattcaggattacactccattccaattggcatatcttaagtacaatttc
cctagagctaagttcacgatgttaggtgacttgaatcaagctatttttactaaagatgaa
agtaaaacacttttgagtcaaatctctaaattgtttgatcctgaaaagacggatgttgtt
caattaaccaagtcttaccgttcaacagaggaaataactaacttcactaagcaaattttg
cgtcaaggtgaaaagattgaagcttttgatagacgtggtccaaagccagccttttacaag
cgcgatagtattgaaaaagaatacagtgccttagaagatatattggccgaaaacgatgaa
caaaagctaacaacagcaattattactaagacattggctgaagctcaagaagttgctaaa
gtattaaaagaaagaaagattaaggcaactttaattgggtcggcaaaccagcgtttagta
ccgggtactttagtaatgccatcctatcttgctaaaggactagaatttgatgcagtagtt
gcttggggtgtttcaaaagaaaattatcatcaattagatgaaactcaattgctttacacc
attgcctcgcgggcaatgtataaattagacttaatttatacaggtgagaagagccctttg
tttgataatttagatgaaaaaacttacgtaaataagtaa
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