Lactobacillus johnsonii N6.2: T285_00200
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Entry
T285_00200 CDS
T02941
Name
(GenBank) exodeoxyribonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ljn
Lactobacillus johnsonii N6.2
Pathway
ljn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ljn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
T285_00200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ljn03400
]
T285_00200
Enzymes [BR:
ljn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
T285_00200
DNA repair and recombination proteins [BR:
ljn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
T285_00200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
AHA96536
UniProt:
A0A7D9N447
LinkDB
All DBs
Position
41612..42439
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AA seq
275 aa
AA seq
DB search
MRLISWNIDSLNAALTSDSPRAQLTRSVLNTIKEKDADIIAIQETKLRSTGPTKKHQEVL
AEMFPNYDYVWRSSEEPARKGYAGTMFLYKNTLTPEVTKPAIGAPDTMDFEGRILTLEFD
NYYVTQVYTPNSGNELKRLEDRQIWDEKYTEYLQKLDKSKPVIASGDYNVAHTPIDLKHP
ENNHHNAGFTDEERQGFDKLLKLGFTDTFRKIHGNVEGVYSWWAQRVRTSKDNNSGWRID
YYIVSDRIADQVTKSEMIDTGDRKDHCPIMLEINL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttaatttcatggaatattgactcccttaatgccgctttaactagtgattcaccg
cgtgcccaacttacgcgtagcgttttaaatacaataaaagaaaaagatgccgatattatt
gctattcaagaaactaaactacgttctactggtccaacaaagaagcaccaagaagttctt
gcagagatgtttcctaactatgactatgtctggcgttcttctgaagagccagcaagaaaa
ggctatgcgggaactatgtttttatataaaaacactttaacgcctgaagtaacaaagccg
gctattggcgccccggatacaatggattttgagggacgaattttaaccttagaattcgat
aattattatgttactcaagtctatactcctaattctggtaatgaattgaagcgattagaa
gatcgtcaaatttgggatgaaaagtatacagaatatttacaaaaattagataaaagtaaa
ccagtaattgcgagtggagactataatgtagcccatactccaattgatttgaaacaccca
gaaaataaccatcataatgctggctttactgatgaagagcgtcaaggctttgataaatta
ttgaagcttggctttactgataccttcagaaaaatacatggtaatgtagaaggtgtttac
tcatggtgggctcaaagagtaagaacgagtaaagacaataactcaggctggagaattgac
tattacattgtttctgatagaattgctgatcaggtaactaaatcagaaatgatcgatacc
ggagatcgcaaagatcattgtccaattatgctagaaattaatttataa
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