Lactobacillus johnsonii N6.2: T285_01890
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Entry
T285_01890 CDS
T02941
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ljn
Lactobacillus johnsonii N6.2
Brite
KEGG Orthology (KO) [BR:
ljn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ljn03400
]
T285_01890
DNA repair and recombination proteins [BR:
ljn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
T285_01890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
Lon_C
AAA
GvpD_P-loop
AAA_24
AAA_16
ABC_tran
AAA_22
AAA_14
DUF7129
RUBY_RBDX
nSTAND3
SLFN-g3_helicase
AAA_5
divDNAB
NACHT
AAA_19
DUF7125
NTPase_1
HypA
MMR_HSR1
NPHP3_N
KTI12
CbiA
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AHA96851
UniProt:
A0A7D9N528
LinkDB
All DBs
Position
409717..411096
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AA seq
459 aa
AA seq
DB search
MAKVKTRYKCRNCGYISASYLGRCPNCGAWNQFEEETQEIKKVSTKATASRLMTKIGNND
PVKLTEVKAEKEKRIVTPFEELNRVLGGGIVPGSLVLIGGDPGIGKSTLMLQITGALAKE
HSVLYVSGEESASQIKMRADRLGVSNSGILLYPETNMQNIRDQIDEIKPDFLVIDSIQTM
NEPSLDSMVGSASQVREVTSELMKIAKNEQITTFVIGHVTKEGAIAGPKIMEHMVDTVLY
FEGDGHHSYRILRSVKNRFGAANEIGMFEMKNEGLAEVSNPSAIFLDERLPNSTGSSVVV
SLEGTRPLLADIQALVTPTAFGYAKRTTSGLDFNRVALLLSVLEKRGNLMLQNQDAFLTA
TGGIKLNEPAIDLAICMAVASSYKNKEISSTDCFVGEVGLTGEIRRVNQIEARVKEAAKV
GFKRIFIPKNNLNQELKNNSEIEVIGVASLPQALKLVFN
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagttaaaactcgttataagtgtcgtaattgtggatatatttctgcttcctat
cttggaagatgtcccaattgtggtgcttggaatcaatttgaagaagagacacaggaaatt
aaaaaagtatcaactaaggcaactgcaagtcggttgatgactaaaattggaaataatgat
ccagtaaagttaactgaagtaaaagctgagaaagaaaaaagaattgtgactccttttgaa
gaattaaatcgagttttaggaggagggattgttccaggatctttagttttaattggagga
gatccaggaattggaaaatcaaccttaatgcttcaaattactggtgctttagctaaagaa
catagcgtcttatatgtttcaggagaagagtccgcaagtcaaataaagatgcgggcagat
cgattaggagtaagcaatagcggaattttgctttatccagaaacaaatatgcagaatatt
cgtgaccagattgatgaaattaagccagattttttggtaattgattctattcaaacaatg
aatgaaccttcacttgattcaatggttggatctgcttctcaagtacgtgaagtaacaagt
gaactaatgaaaattgctaaaaatgaacaaataactacttttgttattggccatgtaact
aaagaaggagcaattgctgggcctaagattatggaacatatggttgataccgttctttac
tttgaaggagatgggcaccactcatatcgaattttaagatcagtaaagaatcgttttggt
gcagctaatgaaattggaatgtttgagatgaaaaatgaagggttagcagaagtaagtaat
ccttcagctattttcttagacgaacgcttacctaattcgactggttcctcagttgttgtt
tcacttgaaggaacgcggcctcttcttgcagatatccaagctttagtaaccccaacagca
ttcggatatgcaaaaagaacaacttcaggattagattttaatcgagtagcacttttattg
tcagttttagaaaaaagaggcaacttaatgcttcaaaatcaagatgcttttctaactgca
actggtgggattaaattaaatgaaccagcaattgatcttgcaatttgcatggcagttgct
tcaagttataaaaataaagaaatttcttcgactgattgctttgtaggtgaagttggcttg
actggtgaaattagaagagttaatcaaattgaagctagagttaaagaggccgcaaaagta
ggctttaagcgaatttttattcctaaaaacaacttaaaccaggagcttaagaataactct
gagatcgaagtaattggagtagcaagtttaccacaagctttaaaacttgtttttaactag
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