Lactobacillus johnsonii N6.2: T285_02020
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Entry
T285_02020 CDS
T02941
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ljn
Lactobacillus johnsonii N6.2
Pathway
ljn03030
DNA replication
ljn03430
Mismatch repair
ljn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ljn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
T285_02020
03430 Mismatch repair
T285_02020
03440 Homologous recombination
T285_02020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ljn03032
]
T285_02020
03400 DNA repair and recombination proteins [BR:
ljn03400
]
T285_02020
Enzymes [BR:
ljn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
T285_02020
DNA replication proteins [BR:
ljn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
T285_02020
DNA repair and recombination proteins [BR:
ljn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
T285_02020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
TIP49
RuvB_N
AAA_22
DNA_pol3_gamma3
AAA_24
AAA_5
AAA_assoc_2
AAA_30
AAA_7
AAA_19
AAA_16
AAA_14
AAA_18
AAA_2
DRE2_N
Rep_fac_C
Sigma54_activat
RCF1-5-like_lid
Viral_helicase1
UfSP_MPN_N
Mg_chelatase
Glyco_tranf_2_5
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
AHA96876
UniProt:
A0A7D9N530
LinkDB
All DBs
Position
431283..433091
Genome browser
AA seq
602 aa
AA seq
DB search
MAYQALYRKWRPRTFDGVVGQTAITDTLKNAIKRGKISHAFLFAGPRGTGKTSCAKIFAK
ALNCTNLQDGEPCNECENCLAADQGTMNDIIEIDAASNNGVDEIRDIRDKVKYAPTQGKY
KVYIIDEVHMLSMGAFNALLKTLEEPPEHVVFILATTELQKVPATIISRTQRYNFKRIDQ
HDLIARMTYILGQEKIDFEEKALEVIAQVADGGMRDSLSILDQILSYDQDKVKYEDALRI
TGYAAQEKIEQVLLNLLNGETSAALEIVHALLQDGASTKNILDELISLTVKGMLALKSNK
EETFLTENYASELAKIPEEKFYSLIQAANNALNDLRYTNQQQIPLDVFVVQVTQAPAKAD
NTPQQAEAISSDVVQTLKNQIDTLSKQVAELKNRPAPARSTTSDFSGTIKTETKSQIRQR
NEQENKPEQKSKRRKTSSNSQAAQENNRRQVYHVLENATKEDLNTVKDIWPDLLSTLKVS
QRAVMEVLDPVAASHEQIVLKCKYELWFERANQDGDLISQLETEIAKLTKHNYSIVLVAD
SSWLKVRHDFVASHKEELLAKKFQRLEKSEQEANGNQIDPQAKKEVIDKAKELFGDLAQI
KD
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcaagcgctatatcgtaaatggcgtccgcgaacttttgatggagtcgtagga
caaacagcgattactgatacattaaaaaatgcaatcaagcgtggcaagatatcacatgct
tttctattcgcaggaccacgtggtactggtaaaacatcatgtgctaaaatttttgccaag
gccttaaattgtactaatctgcaagatggagaaccatgtaatgaatgtgaaaactgtctt
gcagcagatcaaggaacaatgaatgatatcatcgaaatcgatgccgcatctaacaatggt
gttgatgaaattcgagatatcagagataaagtaaaatacgccccaacacagggtaaatat
aaagtctacatcatcgatgaggttcatatgctttcgatgggtgccttcaatgccttactt
aagacactagaagagccgccagagcatgtggtctttatcttagctacaacagagcttcaa
aaggttccagcaactattatttctagaacccagcgctacaatttcaagcggattgatcaa
catgatttaatcgctcgcatgacctatattcttggccaagaaaaaattgactttgaagaa
aaggcccttgaagtaattgctcaagtagctgatggtggaatgcgtgacagtttaagtatc
ttggatcagattttatcttatgatcaagataaggttaaatacgaagatgctttaagaata
actggttatgcggctcaagaaaaaattgaacaagtattattaaatttacttaatggcgaa
acttcagcagctcttgaaatagttcatgcacttttgcaggatggagcatctactaagaac
attttagacgagttaatcagtctaactgttaaagggatgctagcacttaagagtaataag
gaagaaacttttttaactgagaattatgcttccgaattagctaaaattccagaagaaaaa
ttctactcactcatacaagcagctaataatgccttaaatgacttgcgctacactaaccag
caacaaattccgctggatgtatttgtggttcaagtaactcaagctccagcaaaagctgat
aatacacctcaacaagctgaagcaatttcatcagatgttgttcaaactctaaaaaatcaa
attgacactttaagtaagcaagttgcggaattgaaaaatagaccggcacctgctagaagt
actacttcagacttttctggcacaattaaaactgaaactaagtcgcaaattaggcagcgt
aatgaacaagaaaataaaccagaacaaaagtcgaaaagaagaaagactagttctaatagc
caagcggctcaagaaaataaccgccggcaggtatatcatgtgcttgaaaatgccactaag
gaagacctaaatacagtaaaagatatttggccagacttattgtctactctcaaggtatct
caaagagctgtaatggaagttttggatcctgtggctgcaagtcacgagcaaattgtttta
aaatgtaagtatgaattatggtttgagcgagcaaatcaagacggagatctaatttctcaa
cttgaaactgaaattgcgaagctaacaaagcataattatagtattgttttagttgcagat
tcttcatggttgaaagtacggcatgattttgtggcaagtcataaagaagagttacttgct
aaaaaatttcaaagactagaaaaatctgaacaagaagcaaatggtaatcagatagatcct
caagcaaaaaaagaagtcattgataaggctaaagaattgtttggagatctagcacagatt
aaagattaa
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