Lactobacillus johnsonii N6.2: T285_03925
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Entry
T285_03925 CDS
T02941
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ljn
Lactobacillus johnsonii N6.2
Brite
KEGG Orthology (KO) [BR:
ljn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ljn03016
]
T285_03925
Enzymes [BR:
ljn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
T285_03925
Transfer RNA biogenesis [BR:
ljn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
T285_03925
Prokaryotic type
T285_03925
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AHA97203
UniProt:
A0A7D9N5Z2
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All DBs
Position
799935..800828
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AA seq
297 aa
AA seq
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MLNGIVVVNKPRGVTSSDCVYKLRKILQIRKIGHAGTLDPEVNGVLPIAIGQATKLIELM
HEKPKSYIGSGMFGRATDSYDLDGTTTAEEKIVTPFTSDEIISGMKKLTGKIDQVPPIYS
AVRVNGKRLYEYARENIPVERPKRKVNIYNYELTQDPEYDPLEKTESFNFAIRCSKGTYV
RSLVNDLGEELGVLAVMTSLTRTSSSGFDLSQAVDLETIEKEIEYPEKWLQPIDSFFVDL
PQLQISPDQFKRVSNGASIKLNTSYAKVALVYNGHIKAIYQRQGKIYRPEMMLLKNE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgctaaatggaattgtagtagtaaataagccacgcggagtaaccagtagtgactgtgtt
tataaattacgaaaaattttacaaattagaaaaattggacatgcaggtacactggatcca
gaagtaaatggggtattaccgattgcaattggccaagccacaaagctaattgaattgatg
catgaaaaaccaaagtcatatattggaagtggaatgtttgggagagcaactgatagctat
gatttagatggaacaaccactgcagaagaaaagatagttacgccatttacaagtgatgaa
attattagtggaatgaagaaacttactggaaagattgatcaagttcctccaatatattct
gctgtccgtgttaatggtaaaagactttatgaatatgctcgagaaaatattccggtagag
cgtccaaaaagaaaagtaaacatctataattatgaattaactcaagatccagaatatgat
ccactagaaaaaacagagagttttaatttcgccattcgctgttctaaaggaacctatgta
aggtctctagtaaatgatttgggagaggaattgggagttctggctgtgatgaccagtctt
actagaactagcagttcaggttttgatttaagtcaagcggtagatttagaaactattgaa
aaagaaatagagtatcctgaaaaatggctccaaccaattgatagcttttttgtagattta
ccccagcttcaaatatcgccagatcaatttaaaagagtttcaaatggagcaagcattaaa
ttgaataccagttatgctaaggtagctttggtttataatggacatataaaagctatttat
caacgacaaggtaaaatttatcgtcctgaaatgatgcttttaaaaaatgaatag
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