Lactobacillus johnsonii N6.2: T285_04760
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Entry
T285_04760 CDS
T02941
Name
(GenBank) ATP-dependent helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ljn
Lactobacillus johnsonii N6.2
Brite
KEGG Orthology (KO) [BR:
ljn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ljn03400
]
T285_04760
Enzymes [BR:
ljn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
T285_04760
DNA repair and recombination proteins [BR:
ljn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
T285_04760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PDDEXK_1
DEAD
AAA_12
Cellulase
AAA_30
AAA_16
Terminase_6N
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AHA97352
UniProt:
A0A7D9N6L2
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All DBs
Position
967604..971218
Genome browser
AA seq
1204 aa
AA seq
DB search
MTKFTKEQNQAINDYGKDILVSASAGSGKTTVLVERVLKRILSGTPVSSLLIITFTKAAA
REMKERIKQKISDQIEKEPNNQFLRSQLLDVDTANISTIDSFCLDVIRRFYYVIDLDPQF
SVLTDETQAELLKERALHEIEIEYLEKNDQEFQDFYDNFSGDRDAEGARNLLLQLYNTAV
TEPNYEKFLNNLPSSYQVQDDLIKSDLWQGQIKPVLIKEIRDLQNEIKQLFENPQMENPD
LVKVKENYDIFTSHLEQFLNALEDDHSYNEIRANLMNCKFEKNIRKSKKWSEESLETYQE
SQKLKSDLNDQLKKIFANFFVVEEKEQINILKKSEKLVKTIVDAEKKLIKRFGQLKREQN
LIDYSDMEQFAFSILTTDTSNAHIAQEYYQEKFNEILIDEYQDVNALQENIIAAIKKKGQ
NNLFMVGDIKQSIYGFRQARPDLFLSKYHAYGKNDDSEKIILSDNFRSTKRVTKTVNSLF
NPILTANFGGIDYKKEGQLQFGATYYPADLPTASEYIFTDKKQTQASFEENFGDEMDFSE
IQMVIARIKQLKEENFQVWDRKTQLKRPLEYSDIAIITRTRSDNLQVMQEFAKADLPLFV
TDAQNYFQTFELVMIMNYLRLIDNPQQDIPLVAVLRSPLFNFKEPELAQIRVKTRSGNFY
NALTSFASVNSDLGQKCKNCLQQLESLRSFAATHRISELIWSIYERTHLLEIVTGLPNGQ
QRRVNLESLYERATSYESAGFKGLYQFISFIERMRKNQKDLAQPLLSDKADNAVKLMTIH
ASKGLEFPVVFVMGLGHKYQTRDLSGNFTISKDGLGLTIKEKDYRIDSLVKSLADVEKRQ
QMLEEEARILYVGLTRAQQKLILVASVSEMEAKQKKWESEIDQKTNILPLIRKINAQSPL
DFLGPKLEQKHEFDQTIEDMTLALEEQDKIYYLKFAVQSDIEEKDEQKDDTQKLSSKMND
VVKTLYNFEYPFADATKTTAYQSVSEIKKVFNDPMDTELENSRLISSSNRYLQPIDETPV
FLEKQKFTGAEIGTAMHLVLQYYDYQGDKTEINLEQEIEELVELGKLNPLMVPHLSKEAL
NWFVMSEFAAEFWQKPEKLHRESQFSSLVNASELFNDFSDSAAKILVHGTIDGYFETDEG
LILFDYKTDFVDKTHEEQAIDKIKKKYTGQLRLYEQALNEISENKKVIGKYLILLDARKV
VPVD
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
ttgacgaaatttactaaggaacaaaatcaagcaattaatgattatggaaaagatatccta
gtttcagcatctgctggttcaggaaagactacagtattagttgaacgtgttttgaaacgt
attttatctggtacaccagtttcatcccttttgattatcacttttactaaagctgctgct
cgtgaaatgaaggaacgaatcaagcaaaaaataagcgatcaaattgagaaagagcctaat
aatcaatttcttcgtagccaattactagatgttgatactgcaaatatatctacaattgat
tctttttgtttagatgtaattagacgtttttattatgtaattgatcttgatccacaattt
agtgttttaactgatgaaactcaagctgaactgttaaaagagcgtgccctacatgaaata
gaaattgagtaccttgaaaaaaatgatcaagaatttcaggatttttatgataatttttct
ggtgatagggatgctgaaggagcgcgaaatcttttattgcagttgtacaatactgcagtt
actgagcctaattatgaaaaatttctcaataatctgcctagttcttatcaagttcaagat
gatttaattaaatctgacttgtggcagggtcagattaagccagttttaataaaagagata
agggatctacaaaatgagataaaacagctctttgaaaatcctcaaatggaaaatccagat
ttagtgaaggttaaggaaaactacgatatctttaccagtcatttagagcaattcttaaat
gctttggaagatgatcattcttataatgaaattcgagctaatttaatgaattgtaaattt
gaaaagaacattcgcaagtctaaaaagtggtcagaggaaagtcttgaaacttaccaagaa
agtcaaaaactaaaatctgatttaaatgatcaacttaagaagatctttgctaactttttt
gtggtagaggaaaaagaacagataaatattctcaaaaaatcagaaaaattagttaaaacc
attgttgatgctgagaaaaaactaattaagagatttggtcaattaaaacgagaacaaaat
ttaattgactatagtgatatggagcaatttgctttcagcattcttaccaccgatacttca
aatgctcatattgcccaagagtattaccaagaaaaattcaatgaaatattaattgatgag
tatcaagatgttaacgctttgcaggaaaatatcattgcagccatcaaaaagaagggacaa
aacaacctatttatggttggagatataaaacaatctatttatggctttagacaagcacgt
cctgacttgtttttaagcaaatatcatgcttatggaaagaatgatgatagtgaaaaaatc
atcttatcagataattttaggtcaacaaaaagagttactaagacagttaactctttattc
aatccaattttaactgcaaattttggtggaattgattataaaaaagaaggacaattacaa
tttggcgcgacttattatcctgctgacttgcctactgcaagtgaatatattttcacggat
aaaaaacagacgcaagcttcatttgaagaaaatttcggagatgaaatggacttcagtgaa
attcaaatggttattgccagaattaagcaacttaaagaagaaaattttcaagtctgggat
cgaaaaacacaacttaaacgcccgctggaatattctgatattgcgattattacgcgtact
agaagtgacaacttacaggtaatgcaagaatttgcaaaggctgatttacctttatttgta
actgatgctcagaactattttcaaacatttgaattagtaatgattatgaattacttgaga
ttaattgataatccgcagcaggatatccctctagtagcagtcttacgttcaccgcttttt
aactttaaagagcctgaattagcacaaattagggtcaaaactagatccggaaatttttat
aatgctttaaccagctttgcatcagtcaattcggatcttggtcaaaaatgtaaaaactgc
cttcagcaattagaatctctgcgttcatttgcggcaacccatcgaatttctgagttaatt
tggagtatttacgaaagaactcatctgttagaaattgtaactggcttgcctaatggacaa
cagcgtagagtaaacctagaatctctatatgagagagccacttcttacgaaagtgctggt
tttaaaggattatatcaattcattagttttatcgaacgcatgcggaaaaatcaaaaggat
ttagcacaaccacttttaagtgataaggctgataatgctgtaaaactaatgactatccat
gcttctaaaggtctcgaatttccggtagtgtttgtcatgggactaggtcacaagtatcag
acacgcgacttaagtggcaattttacaattagtaaagatggactagggttaacaattaaa
gaaaaagattatcgaattgattccctagttaaatctttagccgatgtcgaaaaaagacaa
caaatgcttgaagaagaagctagaatcttatacgttgggttaacacgtgctcaacaaaag
ctcatcttagttgctagtgtaagtgagatggaagctaagcagaaaaagtgggaaagtgaa
attgatcaaaaaacgaacatccttccattaataagaaaaatcaatgcccagtctccacta
gattttctaggacctaagctagaacaaaagcatgaatttgatcaaacgattgaagacatg
accttagctttagaagagcaagataagatatattacttaaagtttgctgtgcagtcagat
atagaagaaaaggatgagcaaaaagacgatactcaaaaattaagttctaaaatgaatgat
gtagtcaaaaccctttataattttgaatatccatttgcggatgccactaagactacagcc
tatcagtctgtttctgagataaaaaaagtatttaatgatcctatggatactgaacttgag
aattcacgtcttatttcttcaagtaatcgatatttacaaccaattgatgagactcccgta
tttttagaaaaacaaaaatttactggagcagagatcggaacagcgatgcacctagtttta
cagtattatgattatcagggtgataaaactgagataaatttagaacaagaaattgaagag
cttgtagaattaggtaaattaaacccattgatggtgccacatttatcaaaagaagcttta
aattggtttgtaatgagtgaatttgcggcagaattttggcaaaaaccagaaaaattacat
agagaaagccaattctcaagcttagtgaatgctagtgaactgtttaatgatttttctgac
tcagcagctaaaattctagttcatggaacaattgatggatattttgaaacagacgaaggt
ttaattttatttgactataaaactgattttgttgataaaactcatgaagaacaagctata
gacaaaattaagaaaaaatatactgggcaactacgtttatatgaacaagcattaaatgaa
atatcggaaaataaaaaggtaattggaaaatatttaattttgcttgacgcaaggaaagtg
gtcccagtagactag
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