Lactobacillus johnsonii N6.2: T285_05435
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Entry
T285_05435 CDS
T02941
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
ljn
Lactobacillus johnsonii N6.2
Pathway
ljn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ljn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
T285_05435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ljn03400
]
T285_05435
DNA repair and recombination proteins [BR:
ljn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
T285_05435
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH_5
HHH_2
5_3_exonuc
PB2_cap-binding
DUF1687
Motif
Other DBs
NCBI-ProteinID:
AHA97472
UniProt:
A0A7D9N6Y4
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Position
complement(1130118..1131920)
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AA seq
600 aa
AA seq
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MATEHIENKLKLLPDKPGCYLMKDVNGNVIYVGKSKNLKNRVRSYFKSKQVGRRAELVRE
IRDFDIITVSSDKESFLLEITLIKKYQPYYNVQLKQGTGYPYIEITNERDPQTRLTSIVH
KDHGYYFGPYPNVYAAQATLKFIQKVWPLRRCTGHQGRPCLYYHMGQCLGACFKEVPKST
YDAQIRKIKRFLNGDIAQVKQDLTEKMTQASMDLEFERAAEIRDQLKYIEQTVEKQKIIS
NDHTQRDIFNFYVDKSWISIQVFFLRQAKLLRRETRLFPLTDTNDPQDAFVSFIAQFYGQ
RNRVLPKEVLVPAGIDNESLSEVLKVPVRTPQRGQKKALLEMAHDNAKLKLDEKFRLLEL
GNRKTKGAQKEIFDALGLPYGHRIESFDHSHIQGADPVSALVVFTDGEADKHEYRKYKLK
GEVEHQNAADEVGNTREVVRRRYSRLLKEHKKMPDLILMDGGQIQVEACLDVLRNELNVN
IPVAGMVKDDHHRTNHLIFGDPTKGEELKLIPLDPKSEGFYLMTRIQDEVHRFAITFHRR
THAKNALSSKLDEIKGIGPKSRNKLLRKFGSLKKIKEASVDELREAGLTLPQAQTVKLSL
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggaacatattgaaaataaattaaagcttttgcccgataagccaggttgctac
ttgatgaaagatgttaacggcaatgtgatttatgtgggaaagtctaagaacttaaagaac
cgcgttcgttcctattttaaaagtaagcaagtgggaagacgtgctgaacttgtacgtgaa
atacgtgattttgatatcattactgtctcatctgacaaggaatcttttctgttagaaatt
acactaatcaaaaaatatcagccttactataatgtccaattaaagcaaggtacaggctat
ccttacattgaaattactaatgaacgtgatccgcaaacacgtttaacatcaattgttcat
aaggatcatggttattattttggaccatatccaaatgtttatgcagcacaagcaacctta
aaatttattcaaaaagtctggcccctaagaagatgtacaggtcatcaaggccggccctgt
ctttattatcacatggggcaatgtctaggagcttgctttaaggaagtgccaaagagtact
tatgatgctcagattagaaaaataaagcgatttttaaatggagatatagcccaagttaag
caagatctgacagaaaaaatgacgcaagcttcaatggatctagaatttgaacgtgctgct
gaaattagggatcaattgaaatatattgaacaaactgttgagaaacaaaagattatttct
aatgatcatactcagcgggacatctttaatttttacgttgataagtcttggatttcaatc
caagttttctttttaagacaggctaagttattacgtcgtgaaacaagactatttccttta
actgatactaatgatccacaagatgcctttgtttcctttattgctcaattttatggacag
cgcaatcgcgtcttaccaaaagaagtgttagtaccagctggaattgataatgaatcttta
tctgaagtactaaaggtaccagtaaggacaccacaacgtggtcaaaagaaagccttatta
gaaatggctcatgacaatgctaagttgaaactagatgaaaaattccgactcttagaacta
ggtaatcgtaaaactaagggggcacaaaaagaaatttttgacgctttagggctgccgtat
ggacatagaattgaaagttttgaccactctcatattcagggagctgacccggtttctgct
ttggtagtatttactgatggtgaagctgataaacatgaatatcgtaaatacaaattaaag
ggtgaggttgaacatcaaaatgcggctgatgaagtaggaaacacccgtgaagtagttaga
agacgatacagtcgacttttaaaagaacataaaaaaatgccagatcttattttaatggat
ggtggtcagattcaagttgaagcttgtttggatgtgttaagaaatgaattgaatgtaaat
attcctgtcgccggaatggtaaaggatgatcatcaccgaactaatcacttgatttttggt
gatcctacgaagggagaagaattaaagctaattcctttagatccaaaatctgagggattt
tacttaatgaccagaattcaggatgaagttcaccgctttgcaattacttttcatagaaga
actcatgccaaaaatgctctttcaagtaaattagatgaaattaagggtattgggcctaaa
tctagaaataagctcctaagaaagtttggttctttaaagaaaattaaagaagcatcagtg
gatgaattaagagaagctggtctaactcttccgcaagcacaaactgtaaaattgagttta
taa
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