Lactobacillus johnsonii N6.2: T285_06480
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Entry
T285_06480 CDS
T02941
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
ljn
Lactobacillus johnsonii N6.2
Pathway
ljn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ljn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
T285_06480 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ljn03400
]
T285_06480 (uvrA)
DNA repair and recombination proteins [BR:
ljn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
T285_06480 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
T285_06480 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
RsgA_GTPase
AAA_29
nSTAND1
nSTAND3
AAA_22
AAA_23
DnaJ_CXXCXGXG
AAA_33
AAA_18
AAA_21
APS_kinase
AAA_14
BCA_ABC_TP_C
SLFN-g3_helicase
AAA_15
NACHT
Mtrc-MtrF_II-IV_dom
Viral_helicase1
RNA_helicase
cobW
DUF87
MMR_HSR1
Septin
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
AHA97657
UniProt:
A0A7D9N785
LinkDB
All DBs
Position
complement(1332553..1335420)
Genome browser
AA seq
955 aa
AA seq
DB search
MVNDKIVIHGAREHNLKDISLSIPKDKLVVITGLSGSGKSSLAFDTLYAEGRRRYVESLS
SYARQFLGQMDKADVDSIDGLNPAISIDQKTTSHNPRSTVGTVTEINDYLRLLWARVGHP
ICPNDGTLIERQSVDQMVDRVMDLPERSRIQILAPVIRSKRGEHKEVFKRIQRAGYVRVI
VDGEMHEITDEFELDKNKRHSIDIVVDRLIVKENIRSRLFDSVEAALRLADGYMDVDVIK
GERINFSEYYACPICGFTVGEMEPRLFSFNAPFGACPDCDGLGMKLSVDEDLVIPDKDKS
LGEGALVPWANSKYYTAMLEQACTALKIPLDKPYKKLTKRQKDLILNGSKGKKIKFHLEG
DFGVNDTVQEFEGILNNINRRYHHPMSKFMRDAMGKYMTELTCSTCHGKRLNEKALAVKV
NGKDIAEASDLSIAKALEFFNSVKLSEQEEMIAKPILKEVRDRLTFLINVGLDYLTLSRS
AGTLSGGEAQRIRLATQIGSNLSGVMYILDEPSIGLHQRDNDRLISSLKKMRDLGNSLIV
VEHDDETMKQADYLVDMGPGAGVYGGKVMAAGTPEEVMKNPHSLTGEYLSGKKIVPVPLE
RRKGNGKKITVTGAKENNLKDISVDFPLGKLVVVTGVSGSGKSTLVNLILKRALAQKLNN
NSAKPGKYESIKGYKNIEKIIDIDQSPIGRTPRSNPATYTSVFDDIRTLFAQTNEAKMRG
YTKARFSFNVKGGRCEACHGDGIIKIEMNFLPDVYVPCEVCHGTRYNSETLEVTYREKNI
SQVLNMTINEACKFFENIPKIHRKLQTIVDVGLGYVKLGQSATTLSGGEAQRMKLASELQ
KLSTGNNFYILDEPTTGLHTDDIKRLLEVLQRLVDEGNTVLIIEHNLDVIKNADWLIDLG
PEGGDGGGQIVATGTPEEVAQVKESYTGQYLKPVLKRDTELTKQMINNKKEQEES
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatgataaaattgttattcacggagcacgggaacacaatttaaaagatataagt
ttatcaattccaaaagataaattagtagttattactggtttatcgggctctggaaaaagt
tcactggcatttgataccttatatgctgaaggtagaagacgatatgtagaatcgttatca
agttatgctagacaatttttagggcaaatggataaagctgatgttgactcaattgatgga
ttaaatcccgcaatctcaattgatcaaaagacgacatcacataatccacgctcaacggtc
ggaaccgtaacagaaattaacgattatttacgtttattgtgggctcgtgtaggtcatccg
atttgtcccaatgatggaactttaattgaaagacaaagcgtagatcaaatggtggatcga
gtaatggatttgcctgaaagaagtagaattcaaattttagctccagttatccgttctaaa
agaggagaacataaagaggtatttaagcgaattcagcgtgcggggtatgtacgggtaatt
gtagatggcgaaatgcatgaaattactgatgagtttgagctagataaaaacaagcgacac
agtattgatattgttgtggatcgtctaattgttaaagaaaatattcgtagtcggttattt
gattcggtagaagcagcccttcgtttagccgatggttacatggatgttgatgtgattaag
ggagaacgcattaacttttcagaatactatgcttgtccgatttgtggttttactgttggt
gaaatggaaccgcgtttattttcattcaatgcgccttttggagcttgtcctgattgtgat
ggactaggtatgaagctttcagtagatgaagatttagtaattcctgataaggataagtca
ttaggtgaaggagctttagttccttgggctaactctaagtactatacagcgatgttagaa
caagcctgtacagccttgaaaatccccttagataaaccatataaaaaattaactaaaaga
caaaaggatttaattttaaatggatctaaaggaaagaaaataaaattccatctcgaagga
gactttggtgtaaacgatacagttcaagaatttgaaggaattttaaataatatcaatcgt
cgataccaccatccaatgtctaaattcatgcgtgatgcaatgggtaagtatatgactgaa
ctgacttgttcaacttgtcatggtaaaagattgaatgaaaaggctttagccgtgaaagta
aatggtaaagatattgctgaagcatctgatctttcgattgcaaaagcattagaatttttc
aattcagttaaattaagtgaacaagaagaaatgattgctaagccaattttgaaagaagta
cgggatcgtttgacatttttaattaatgttggattagactatcttactttatctcgttct
gctggcactctatctggtggagaagcgcaaagaattagactagcaactcaaattggttct
aacttgtcaggcgttatgtatattctagatgaaccatcaattggtcttcatcagcgtgac
aatgatcgtcttatttcttcccttaagaaaatgagagatcttggaaattctctaattgta
gtagaacatgatgatgaaaccatgaagcaagccgattacttagttgatatgggaccggga
gccggagtatacggcggaaaagtgatggctgcaggtacgcctgaagaagtaatgaagaat
ccccattctttaactggggagtacttatcaggtaaaaagattgttccagttccattagag
cgaagaaaaggtaacggtaaaaaaataactgttactggtgcaaaagaaaataatttaaaa
gatatttctgttgattttcctttaggtaaattagttgttgtaaccggagtatcaggttcc
ggaaaatcaacattagttaacttgattttgaaacgtgctctggcacagaagttaaataat
aactctgcaaagcccggtaagtatgaatcaattaagggatataaaaatatcgaaaaaatt
atagatattgatcaaagtcctattggacgaactccgcgtagtaatccagccacatatact
agtgtatttgatgatattcgtactttatttgcccagactaatgaagcaaaaatgcgtggc
tatactaaggctaggttttcttttaacgttaagggcggtcgctgtgaagcatgtcatgga
gatggaattattaagatagaaatgaatttcttgcctgatgtgtatgtcccttgcgaagtt
tgtcacggaacaagatataactcagaaaccttagaagtaacctaccgtgaaaaaaatatt
tctcaagttttaaacatgacaattaacgaagcatgcaaattctttgaaaatattcctaaa
attcatcgtaagttacaaacaattgttgatgtaggattaggatatgtaaagttaggacaa
tcagcaactactttgtctggtggggaagcacaaagaatgaagttagcttctgaattacaa
aaactttctactggaaataacttctatatcttggatgaacctacaacagggttacacact
gatgacattaaacggctgttagaggtattgcagcgcttagttgatgaaggaaatacagtt
ttaattattgaacataacttagacgtcattaaaaatgcagattggctaattgatctaggc
cctgaaggaggagatggcggtggacaaattgtggctactggtactccagaagaagttgct
caagtcaaagaaagttatactggtcaatatttaaaacctgttcttaaaagagatactgaa
ttaactaagcaaatgataaataataaaaaagagcaagaagaaagttaa
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