Lactobacillus johnsonii N6.2: T285_07315
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Entry
T285_07315 CDS
T02941
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ljn
Lactobacillus johnsonii N6.2
Pathway
ljn03420
Nucleotide excision repair
ljn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ljn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
T285_07315
03430 Mismatch repair
T285_07315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ljn03400
]
T285_07315
Enzymes [BR:
ljn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
T285_07315
DNA repair and recombination proteins [BR:
ljn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
T285_07315
MMR (mismatch excision repair)
Other MMR factors
T285_07315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
DEAD
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AHA97812
UniProt:
A0A7D9N7X9
LinkDB
All DBs
Position
complement(1516339..1518585)
Genome browser
AA seq
748 aa
AA seq
DB search
MSEETILAELNPQQKKAVQCTEGPLLVVAGAGSGKTSVLTRRIAYLIEEKGVAPWNVLAI
TFTNKAATEMKERVQKLLGQAADSVWMSTFHALCVRILRRDAEKIGYSNNFSIADSAEQL
TLIKRIEKDLNINPKMYDPKAILGAISNGKNDLLTPKDFKEQAASPFEKVTAQVYSEYQH
RLKRDQIMDFDDLIMQTLVLFKKDKESLHYYQNKFRYILVDEYQDTNEAQYQLCVALAAQ
YKNICVVGDADQSIYGWRGANMENILNFEHDYQDDEVTTIKLEQNYRSTGHILDAANSVI
KNNLKRKPKKLWTDKGAGDKINYYRAQSGNDEALFIISKIKEEIKEHQRDYKDFAVLYRT
NAQSRNVEEALVKANIPYRIVGGHKFYNRKEIKDILAYLKVVANPADSMSFNRIINVPKR
GLGPTTMAKFNGFANDNDFTVEETFKNLSLAPITGRPARTLATFGTALRDAIEYSKTHGV
TGLTEKILADFGYKEALENEHTIEADTRLENLNEFLTVTKRFDDNYEPEDEDSTALGDFI
SEISLLSDQDDLENQDNQVALMTLHAAKGLEFPVVFLVGMEEGLFPLSRAVEDPSELEEE
RRLAYVGITRAEKKLYITNAFSRMMYGRPQRNQPSRFIDEIEDKDLEFVNPMPSNSVISV
PFAINRKEQANSHVYPPKMTIEEAKKATGAVGAEKKSWNVGDQVTHNAWGKGVVVKVNGT
GEDMELDIAFASQGVKRLLAAFAPIKKI
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaaacaattcttgcagaattaaatcctcagcaaaaaaaagccgtgcagtgt
actgaaggtccacttttagtagttgccggagctggtagtggaaaaacatcagttttaaca
cgtcgaattgcctatttaattgaagaaaagggcgttgcgccatggaatgttttagccatt
acttttactaataaggctgcaactgaaatgaaagaacgtgtccaaaagttattagggcaa
gcagctgacagtgtttggatgtcaacttttcatgctttatgtgtccgtattttacgtcgt
gatgcagaaaaaattggctactctaataatttttcaattgctgattctgcagaacaattg
acactaattaagcgaattgaaaaggatcttaatattaatcctaaaatgtatgatccaaaa
gcaattttaggcgctatttcgaatggaaaaaatgacttacttactccaaaagactttaag
gagcaagcagctagtccgtttgaaaaggtaacagcgcaagtatatagcgaatatcaacat
cgcttaaagcgtgaccaaattatggattttgatgatttaattatgcaaacgctcgtctta
tttaagaaggacaaagaaagtttgcactattatcaaaataaattccgctatattttagta
gatgagtatcaagatacgaatgaagcacagtatcaactttgtgttgctttagctgctcaa
tataaaaatatttgcgttgttggggatgcagatcagtcgatctatggttggcgcggagct
aacatggaaaatattcttaattttgagcatgactatcaagatgatgaagttactactatt
aaattagagcaaaactaccgttctactggccatattcttgatgcagctaactcggtaatt
aaaaataatctgaaacgtaaacctaagaaactttggacggataaaggcgctggcgataaa
atcaattattaccgtgctcaaagtggaaatgatgaagcactgtttatcatttcaaagatt
aaagaagaaataaaagaacatcaaagagactacaaggattttgccgttctttatcggacc
aatgctcaatcacgtaatgtcgaagaagccctagttaaagctaatattccgtatcggatt
gttggaggacataagttctacaaccgaaaagaaattaaagatattttggcttatttaaaa
gttgtcgcaaatcctgctgattcaatgagtttcaaccgaattattaatgtaccaaaacgt
ggtttgggtccaactacgatggctaagtttaacggttttgctaatgataatgactttaca
gtagaagagacttttaagaatttgagcttagcaccaattacgggtcgcccagctagaacg
ctagctacttttggaacggccttaagagatgcaatcgaatatagtaagacgcatggtgta
acaggtttaacggaaaaaatattagctgatttcggctacaaagaagctttagaaaatgaa
cacacaattgaagcagatactagattagaaaacttaaatgaatttctgactgttactaag
cgctttgacgataattatgagcccgaagatgaagattcaacagctttaggtgattttatt
tcagagatctcattattaagtgatcaagatgatttagaaaatcaagataaccaagttgca
ttgatgactcttcatgccgctaagggactagagtttccggtggtcttcttggttggaatg
gaagagggactcttcccactttcaagagcagtagaagatccaagtgaacttgaagaagaa
cgtcgactagcctatgtcggaattacgcgagctgaaaagaaactctacataaccaatgct
ttttctagaatgatgtatggccgtccgcaacgtaatcaaccatcacgctttattgatgag
attgaagataaggatttagaatttgttaacccaatgccatctaattctgtcatctctgtt
ccctttgctattaatagaaaggaacaagctaactctcatgtttaccctccaaagatgaca
attgaggaggctaagaaagcaactggtgcagttggagctgagaaaaagtcctggaatgtt
ggtgatcaagttacacataacgcatggggaaaaggcgttgtagtcaaagttaacggtact
ggtgaagatatggaattagatattgcctttgctagccaaggagtgaaacgccttttagct
gcctttgcaccgattaaaaagatataa
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