Lactobacillus johnsonii N6.2: T285_08095
Help
Entry
T285_08095 CDS
T02941
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ljn
Lactobacillus johnsonii N6.2
Pathway
ljn03420
Nucleotide excision repair
ljn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ljn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
T285_08095
03430 Mismatch repair
T285_08095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ljn03400
]
T285_08095
Enzymes [BR:
ljn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
T285_08095
DNA repair and recombination proteins [BR:
ljn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
T285_08095
MMR (mismatch excision repair)
Other MMR factors
T285_08095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C_2
UvrD-helicase
AAA_19
UvrD_C
SLFN-g3_helicase
AAA_30
TMV_coat
DUF6852
DEAD
Catalase_C
AAA_16
NACHT
Motif
Other DBs
NCBI-ProteinID:
AHA97919
UniProt:
A0A7D9N8B2
LinkDB
All DBs
Position
complement(1663520..1665814)
Genome browser
AA seq
764 aa
AA seq
DB search
MVKETEQQKEQKHLDDVLGLIKKKEKELDHSIEHAQNEAQNINSHFFDDVKLDYDGYSTS
MDTALSIHQQQQMLAERQNAWQHSAKQLSTLQRLEKKPYFARVDFQEPNEEPETIYIGLG
SFADKEDHFLIYDWRAPISSIYYDGKLGKVSYNAPDGVQTVDMTKKRQFLIKDGKITNMF
DTNESIGDQMLLNVLNEKSSTQMKSIVTTIQREQNKIIRNTSADLLFVQGAAGSGKTSAI
MQRVAYLLYRYRGNLTSSDVIMFSPNQLFNDYVKNVLPEMGEQNMVQMTYWQFVSRRVPG
MNVENLFEQFEDNEQNDKIVNLKNSLQFFNAVTRYAKHLEKNGLVFKNIYFKSKEKPFFD
KEKIKEIYYGFNENYHLRNRIEATKEALINSLNRRIEPETKKAWVDKTIESLDQEQLNKL
YDRPDQEFESSAKEEHFLARKIVINQLKQVSRKICQNRFLNIRAQYLRFLRAVPKIIDLS
KWDITQEEWDAHIENVKGRFKAGRIKMADISPYLYLYDLVTGRRTDYEMRYAFIDEIQDY
TPFQLAYLKYNFPRAKFTMLGDLNQAIFTKDESKTLLSQISKLFDPEKTDVVQLTKSYRS
TKEITNFTKQILRQGEKIEAFDRRGPKPAFYKRDSIEKEYNALQDILVENDEQKLTTAII
TKTLAEAQEVAKVLKERNIKATLIGSANQRLVPGTLVMPSYLAKGLEFDAVVAWGVSKEN
YHQLDETQLLYTIASRAMYKLDLIYTGEKSPLFDNLDEKTYVNK
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
ttggtaaaagaaactgaacaacaaaaagagcaaaagcatctagatgatgttcttggctta
attaagaagaaagaaaaagagcttgatcattcaatcgaacatgcacaaaatgaagctcaa
aatatcaattcacacttttttgatgatgtgaaattagattatgatggctactccacttca
atggatactgctttgtctattcaccagcaacaacaaatgttagcggaaagacaaaatgcc
tggcaacattcagctaagcaattatcaaccttgcagcgtttagaaaagaagccatatttt
gcaagagttgattttcaagaacctaatgaagaaccagaaactatttatattggattaggt
tcttttgcagataaagaagatcattttttaatctatgattggcgtgcaccaatatcttct
atttactatgatggaaaattaggaaaagtatcatataatgcaccagatggtgtgcaaact
gttgatatgactaagaagcgtcaatttttaattaaagatggcaagattactaatatgttt
gataccaatgaatccattggggatcaaatgctcttaaatgtcttgaatgaaaaatcatct
acacagatgaagtcaattgtgactaccattcaacgtgagcaaaataaaattattagaaat
actagtgctgatcttttatttgttcaaggggctgctggttcgggtaagacatctgccatt
atgcagcgtgtggcctacttactatatcgctaccgtggtaatttgacttctagcgatgtt
attatgttcagcccaaatcaattatttaatgattatgttaaaaatgttcttccggaaatg
ggagaacagaatatggttcaaatgacttactggcagtttgtttctcgccgtgttcccgga
atgaacgttgaaaacttatttgaacaattcgaagataatgagcaaaacgataagattgtt
aacttgaagaattcattgcaattctttaatgcagtaactcgctatgctaaacatcttgaa
aagaatggtttggtttttaagaacatttactttaagagtaaggaaaaaccattttttgat
aaggaaaagatcaaggaaatttactacggctttaatgaaaactaccacttaaggaataga
attgaagctacaaaagaagctttgattaatagcttaaaccgcagaattgaacctgaaact
aagaaggcatgggttgataaaactattgaatccttggatcaagaacaattaaataagctg
tatgatcgtccagatcaagaatttgaatctagtgcaaaagaagagcactttttagctcgt
aagattgtaattaatcaattaaagcaagttagtcgcaagatttgtcagaatcgcttttta
aatattcgtgcacaatacttacgctttttacgtgccgttcctaagataattgacttaagt
aaatgggacattactcaagaggagtgggatgctcatattgaaaatgttaaagggcggttt
aaggctggaagaatcaagatggccgatatttctccttacctttacctatatgatctagta
actggacgtagaacagattatgaaatgcgctatgcctttattgatgaaattcaggattac
actccattccaattggcatatcttaagtacaatttccctagagctaagttcacgatgtta
ggtgacttgaatcaagctatttttactaaagatgaaagtaaaacacttttgagtcaaatc
tctaaattgtttgatcctgaaaagacggatgttgttcaattaaccaagtcttaccgttca
acaaaggaaataactaacttcactaagcaaattttgcgtcaaggtgaaaagattgaagct
tttgatagacgtggtccaaagccagccttttacaagcgtgatagcattgaaaaagaatac
aatgccttgcaagatatattggtagaaaacgatgaacaaaagctaacaacagcaattatt
actaagacattggctgaagctcaagaagttgctaaagtattaaaagaaagaaatattaag
gcaactttgattgggtcggcaaaccagcgtttagtgcctggtactttagtaatgccatcc
tatcttgctaaaggactagaatttgatgcagtagttgcttggggcgtttcaaaagaaaac
tatcatcaattagatgaaactcaattgctttacactattgcttcacgtgcaatgtataaa
ttagacttaatttatacaggtgagaagagtcctttgtttgataatttagatgaaaaaact
tacgtaaataagtaa
DBGET
integrated database retrieval system
