Lactobacillus johnsonii N6.2: T285_08130
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Entry
T285_08130 CDS
T02941
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
ljn
Lactobacillus johnsonii N6.2
Pathway
ljn00550
Peptidoglycan biosynthesis
ljn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ljn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
T285_08130
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ljn01002
]
T285_08130
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ljn01011
]
T285_08130
Enzymes [BR:
ljn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
T285_08130
Peptidases and inhibitors [BR:
ljn01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
T285_08130
Peptidoglycan biosynthesis and degradation proteins [BR:
ljn01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
T285_08130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
YkuD
Beta-lactamase2
PBP5_C
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AHA97925
UniProt:
A0A7D9N7T5
LinkDB
All DBs
Position
complement(1673740..1675602)
Genome browser
AA seq
620 aa
AA seq
DB search
MEKYKIKILKGLLPFFCFLIYFFAKSVNVNGASIDNYNENQVDLDVKSALAIDVNSGQIL
YAKNANKKLPVASMSKLITVYLTLDAIKNKEISWDQRVQPTKQIVAVSNDPEYSGIPLQM
NHSYTIKQLYEATLIDSANGPAMLLGEAISGSQQSFVKKMRHQLSTWNITGEGTQIVTPS
GLPNYTLGEESFKDKDKDAENILSASDMAIIISHLLKDFPQVLDTTSKANSSFIDQDQTI
SMESSNWMLKGLSEYDSNYPVDGLKTGTTDAAGACFSATMQKEGQRIATVILGAQHVDGN
DPSRFIQTKKLMDYIFDHYKIKEITAKNKVSKITRVKIDDGEKKSALVYMKKPTKLWLPK
EQKISNLKVKFSKSALQAPLTKNEKVGEFYISNLPTLNSSHGVGIEATVHENIKKINPLM
NLFSYVNQAAKKYYQSIFNYGEKREKNSKSKVKTKKDEKPYPDPADLAEVGTWNKKSEAK
GHPNLAKVKNLWIRVSLKGNRTYIMSGNKPIYTMLSTGGAYHKNKSDTPTGTYYIQEERG
DDFYNNELNEGAKYYVSWKDHGVYLFHSVPTKSDGSINKKEAAKLGRSSGSHGCIRLSVP
DSKWLAETVPVGTKVVIKDK
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatacaagatcaaaatacttaaaggcttattaccatttttttgttttttaatc
tacttttttgctaaatcagtaaacgtgaatggtgcttctatagataactataatgaaaat
caagtcgatcttgatgtgaaatccgccttagcaatagatgtaaatagtggacaaatttta
tatgctaaaaatgctaataagaagttgccagtagcctctatgtcaaagttaattactgta
tatttaactttagatgcaattaagaataaagaaataagttgggatcaacgagtacaaccg
actaaacaaattgtagctgttagcaatgacccagaatattctggtattcctttacaaatg
aatcatagttataccattaagcaattgtatgaagcaactttgattgactcagcaaatgga
cccgcaatgctcttgggagaagcaattagtggatcgcagcagtcctttgtaaagaaaatg
agacaccaattgagtacttggaatataactggggagggtacacagatcgttacacccagt
ggcttgcctaattacacgttaggtgaagaatccttcaaggataaagataaagatgcagaa
aatattctatctgcatctgatatggcaattataatttcacacttactaaaggattttcct
caagtattagatacaacgagtaaggcaaacagctcctttatagatcaagaccaaaccatt
tcaatggaaagttcaaattggatgctgaaaggtctatctgaatatgattctaactatcca
gtcgatggtttaaaaactggaacgactgatgcagcaggagcgtgtttttctgcgacaatg
caaaaagagggacagcgaattgctacagtaatacttggagcgcaacatgttgatggaaat
gatccttctcgctttatacagactaaaaaattaatggattatatttttgatcattataaa
attaaagaaattacagccaaaaataaagtttcaaaaataactagagtaaaaattgatgat
ggtgagaaaaaatcagctttagtttatatgaaaaaaccaaccaaactatggttaccaaaa
gaacagaaaatttctaatttaaaagttaagttctctaaaagtgcacttcaggcgccccta
actaaaaatgaaaaagtgggcgagttttatatttccaatcttccaactttaaactcatca
catggggtaggaattgaagcaactgtccatgaaaatattaagaaaattaatcctttaatg
aacttattttcctatgtaaatcaagctgcaaaaaaatattatcagtctatatttaattat
ggagaaaaaagagagaagaattcaaaatctaaagttaaaacaaaaaaagatgaaaagcct
tatcctgacccagcagatttagcagaagttggaacgtggaataaaaagagtgaagctaaa
ggtcatcctaatttagcaaaagtaaaaaatctatggattagagtttctctaaagggaaat
cggacttatattatgagtggaaataagccaatctatactatgctttcaactggtggcgct
taccataagaataagtctgatacccctacaggaacttattatattcaggaggaacgcggt
gatgatttttacaacaatgaattgaatgaaggggctaaatattatgttagctggaaagat
cacggagtatatctatttcactccgtacctactaaatctgatggttctattaacaaaaaa
gaagcagcaaaactcggaagaagttcgggatcccacgggtgtattagattaagtgtccca
gattcaaagtggcttgcagaaactgttcctgtagggacaaaagtagtaattaaagacaaa
taa
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