Lactobacillus johnsonii N6.2: T285_09085
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Entry
T285_09085 CDS
T02941
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
ljn
Lactobacillus johnsonii N6.2
Pathway
ljn00330
Arginine and proline metabolism
ljn00480
Glutathione metabolism
ljn01100
Metabolic pathways
ljn01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ljn00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
T285_09085
09106 Metabolism of other amino acids
00480 Glutathione metabolism
T285_09085
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
T285_09085
Enzymes [BR:
ljn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
T285_09085
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
Beta_elim_lyase
DUF5752
Motif
Other DBs
NCBI-ProteinID:
AHA98102
UniProt:
A0A7D9N8Q7
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Position
1867970..1870069
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AA seq
699 aa
AA seq
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MNFLKIALSNQLKNNDFNSWQTTNLNDETQASELAAIVVAETDKSSLKTAQDLQKKSGLG
IPIIKVSHETISNNEKNQIIDAANQYTSEMVPGFLTDLVNFAEDRPVSFTTPGHHNGLYY
EKHPAGVVFNRFFGKNLMFADTSDTVPELGDTMTHEGTPLTAEQKAAETYHADKVYFCTN
GTTSANSICANALLTKDDLVLFDRNNHKSLYNSALVMTGAKPVYIPTDRNALGLIGEMDP
NFLSEEKIRAEIAKVDPEKAKAKRPFRLAIIQSETYDGLFYDAKWMIDKIGKLCDYILFD
CAWGGFEQFVPIMNHLSPLNLDFGPEDPGILVTQSLHKQQAGMGQASQILKKDAHIKGQK
RYVDHKHFNHAYLKFVTSSYSYPLYASLTVNSYLTSGEGNKKWWDQILRLGIEWRKELIK
KSKLFKPLVIDNFENISTDELATNEKYWNLDSTNLWHGFSKIASGQAMIDPLKITVVTPG
IDVKNAKYKEIGIPGPVVAEFLMEKRIIRAKDDLYSLLFLLTPGDTKAELDILLNAFLEF
EQYYNEDAPLDKVLPKLTKVYGDRYKGYTLKQLCQEMHEYYRGNNTFTLQQELFAKPDMQ
NYQMTPEHADYLFMKNESELVNLEDVKGRIAAEGALPYPPGVFIVAPGEKWSDIDQKYFE
VLVGAIERFPGFVPEIQGVYWDQKSDGKIRVQAEVLKEN
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgaattttctaaaaattgcgttaagcaatcaactaaaaaataatgattttaattcatgg
caaactactaatttgaacgatgaaactcaagctagtgaacttgccgctattgttgtagca
gagactgataaaagtagtcttaaaactgctcaagatttacaaaaaaaatcagggcttgga
attcctattattaaagtttcacatgaaacaatttctaataatgaaaaaaatcaaataatc
gatgccgcaaatcaatatacatcagaaatggttcctggatttttaactgatttggtcaat
tttgcagaagatcgtccagttagttttactacaccaggtcatcataatggcttatattac
gaaaaacatccagcgggagtagtatttaatcgcttctttggtaaaaacctcatgtttgct
gataccagtgatacagtaccagaattaggcgataccatgacccacgaaggaacgccttta
actgctgagcaaaaagccgccgaaacttaccacgccgacaaagtttatttctgtactaat
ggaacaacgagtgcaaattcaatttgtgcaaatgcattattaactaaagatgacttagtt
ctttttgatcgaaataatcataaatccctctataacagtgccttagtaatgactggtgcc
aaaccagtatatattccaaccgatcgtaatgcgcttggattaattggagaaatggatcct
aacttcttaagtgaagaaaaaattcgcgctgaaattgctaaagttgaccctgaaaaagct
aaagctaaacgtccatttagactggctatcattcaatcagagacatatgatggactcttt
tatgacgcaaagtggatgattgataaaatcggtaaactatgcgattacattctttttgat
tgtgcttggggtggattcgaacagtttgttccaattatgaatcacctgtctcccctcaac
ttagactttgggccagaagatccgggtattttagtaactcaatcacttcataaacaacaa
gctgggatgggccaagcctcacaaattttgaaaaaagatgctcatattaaaggtcagaaa
cgttacgttgatcataagcactttaaccacgcttatcttaaatttgttacttcaagttac
tcttatcccctttatgcctcactcaccgttaactcatatttaaccagcggtgagggtaat
aaaaaatggtgggaccaaatcttacgcttaggaattgaatggcggaaagaattaattaaa
aaatcaaaattatttaagccactagtaattgataattttgaaaatattagtactgatgag
ttagctacaaatgaaaagtactggaatttagattccactaatctgtggcatggatttagc
aaaattgcgtctggtcaggccatgatcgatcctctaaaaattactgttgtaactcccgga
attgatgttaaaaatgcaaaatataaagaaataggtattcctggaccagttgttgcagaa
tttttaatggagaagcggattattcgtgcaaaagatgacctatattctcttcttttctta
ttaacgccgggagatactaaggctgaattagatatcttgctgaatgcattcttagaattt
gaacaatattataacgaggatgcacctctagacaaagtgctccctaagctaactaaagta
tacggcgatcgctacaaaggttataccttaaaacagctctgccaagaaatgcatgaatat
taccggggaaataatacctttaccctccagcaagaattatttgcgaaaccagatatgcaa
aattatcaaatgactcccgagcatgctgactatctctttatgaaaaatgaaagtgaatta
gttaacttagaagatgttaaaggtcgcattgctgctgaaggtgccttaccttacccacca
ggcgtgttcattgttgcgccaggcgaaaaatggagcgatattgatcaaaaatattttgaa
gttttagtaggtgctatcgagcgtttcccaggctttgtacctgaaattcagggagtctac
tgggatcaaaaatcagatggtaaaataagagtacaagcagaagtattaaaggagaattag
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