Lactobacillus johnsonii NCC 533: LJ_0005
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Entry
LJ_0005 CDS
T00158
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ljo
Lactobacillus johnsonii NCC 533
Brite
KEGG Orthology (KO) [BR:
ljo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ljo03032
]
LJ_0005
03400 DNA repair and recombination proteins [BR:
ljo03400
]
LJ_0005
Enzymes [BR:
ljo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LJ_0005
DNA replication proteins [BR:
ljo03032
]
Prokaryotic type
DNA Topoisomerases
LJ_0005
DNA repair and recombination proteins [BR:
ljo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LJ_0005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
LRS4
Motif
Other DBs
NCBI-ProteinID:
AAS07986
UniProt:
Q74M29
LinkDB
All DBs
Position
6207..8696
Genome browser
AA seq
829 aa
AA seq
DB search
MANENQPQDHRIRNVDLTHTMRTSFLDYAMSVIVARALPDVRDGLKPVQRRILYGMHELG
VTPDKQYKKSARIVGEVMGKFHPHGDSSIYLAMAHMAQDFSYRYMLVDGHGNFGSVDGDE
PAAMRYTEAKMSKIAVEMLRDINKETIDWQRNYDDTENEPVVLPARIPNLLVNGASGIAV
GMTTNIPPHNLAEVIRGIHMLMDNPDVTTKDLMKVIPGPDFPTGGIVMGRGGIYRAYETG
KGNIVVRAKTEIETEKNGRERIVVTELPYLVNKAELVKKIADLAREKTIDGITGVRDESD
QTGMRITIDIRRDASASVVLNNLFKETQMQANFGMNMVAIVNGAPHFLTLKQMLEYYLHH
QEDVITRRTKFELKKAEARAHILAGLRIALDHIDEIIKIIRGSQNSDIAKAQLIQNFGLD
DRQSQAILDMRLVRLTGLERDKIEAEYQDLQAKIADYKDILAKPERIDEIIYNELLDIQK
RFGDDRRTKIAEGEAVSIEDEDLIEQKDVLLTLTHNGYIKRMPADEFKVQNRGGRGIKGM
GVQDDDFINHLIFSSTHDFLLFFTNLGKVYSKKAYEIPEFGRNAKGLPIVNLLELDKGEK
IQAVINVPEGADDNYLFFVTKMGTVKRTKVSEFQNIRRSGLIALTLRDGDELNNVLTTDG
KQNILIGTHLGYAVTFNEKDVRSMGRTAAGVRGINLRDNDYVVGSDILEPDSEVLVISEK
GYGKRTAASEYPVKGRGGKGIKTANITEKNGPLAGVTVVNGDEDIMLITSAGVMIRFDVD
DVSQTGRATLGVRLIKVDDGAQVASITAVPKASDEDEESTAEEEPVKEN
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgaaaatcaacctcaagatcacagaatacgtaatgttgatttaacccatacc
atgcgtacatccttcttagactacgctatgtcagttattgtggctcgtgccttaccagat
gttcgagatggtttaaagcctgtacaacgtcgtattctttacggaatgcatgaattagga
gttacaccagataagcaatataagaagagtgccagaattgttggggaagttatgggtaag
tttcacccgcatggtgactcttcaatctatctagctatggcccacatggctcaagacttt
tcatatcgttacatgctagttgatggacacggaaattttggttctgtcgatggggatgaa
ccagccgcaatgcgttatactgaggcaaaaatgagcaagattgcggttgaaatgcttcgt
gatatcaataaagaaactattgattggcaacgtaactacgatgatacagaaaatgaacca
gtagtattaccagcaagaattcctaacttacttgtcaatggtgccagtggtattgcagtt
ggtatgacaacaaatattccaccacataatttggcagaggtaattcgcggcattcacatg
ttgatggataaccccgatgttactaccaaggatttaatgaaagttattcctggtccagat
tttccaactggtggaattgtgatgggacgcggaggtatttaccgtgcctatgaaaccgga
aaaggaaatatcgttgttcgggcaaagaccgagattgaaactgaaaaaaatggtcgcgag
cgaattgtagttacggaacttccttacttagtaaataaggctgaattagttaaaaagata
gctgatttagcccgtgaaaagacaattgatggtattactggtgtacgggatgaatcagac
cagactggtatgagaattaccattgatattcgccgtgatgcaagtgctagtgtggttttg
aataatttatttaaagaaacccaaatgcaagcaaacttcggaatgaatatggtggccatt
gttaatggtgcaccgcatttcctaactttgaagcaaatgcttgagtactaccttcaccac
caagaagatgttattactcgtagaactaagtttgagttaaagaaggctgaagctagagca
catattttagctggattaagaattgcccttgatcatatcgatgagatcattaagattatt
cgcggttcacaaaatagcgatattgctaaggcacaattaattcaaaactttggcttagac
gatcgtcaatctcaagctattttagatatgagattggttcgtttaacaggcttagagcgc
gataaaattgaagctgaatatcaagatttgcaagcaaaaatagcagattacaaagatatc
ttagctaaaccagaacgaattgatgagattatttacaacgagttacttgatattcaaaag
cgttttggtgatgatcgtcgtactaagattgccgaaggtgaagcagtttcaattgaagat
gaagatttaattgaacaaaaagatgttcttttaactctaactcataatggctacattaag
cgtatgccagcggatgaattcaaggttcaaaaccgcggtggacgtggaataaagggaatg
ggagtgcaagatgatgatttcattaaccatttaatcttctcaagtacccatgacttttta
ctattcttcaccaacttaggtaaggtttactcaaagaaagcctatgaaattccagaattt
ggaagaaatgctaaaggcttgccaatagttaacctcttggaacttgataaaggtgaaaaa
attcaagctgtaattaatgtacccgaaggagcggacgataattatctcttctttgttact
aagatgggaacagttaaaagaacaaaagtcagcgaattccagaatattcgtcgaagtggg
ttaattgccttaactttacgagatggggatgaactgaataatgttttaactaccgatgga
aaacaaaatattcttatcggtacccatttaggttatgcagttacctttaatgaaaaagat
gttcgttcgatgggaagaacagcagctggtgtccgcggaatcaatttaagagataacgat
tatgtcgttggatctgatattctagaacctgattcagaagtattagtaatttctgaaaaa
ggatatggaaaacgtactgcagcttctgaatacccagttaagggacgcggcggtaaagga
attaagactgcaaacattactgaaaagaacggtcctttagccggtgtaacagtagttaat
ggcgatgaagatattatgctaattaccagtgcgggagtcatgattcgatttgatgtggac
gatgtttctcaaactggaagagctacattgggtgtacgtttaatcaaggttgacgatggt
gcacaagtagcaagtattactgccgttcctaaagctagtgatgaagacgaagaaagcact
gctgaagaagaaccagtaaaagaaaattaa
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