Lactobacillus johnsonii NCC 533: LJ_0649
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Entry
LJ_0649 CDS
T00158
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ljo
Lactobacillus johnsonii NCC 533
Pathway
ljo03030
DNA replication
ljo03430
Mismatch repair
ljo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ljo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LJ_0649
03430 Mismatch repair
LJ_0649
03440 Homologous recombination
LJ_0649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ljo03032
]
LJ_0649
03400 DNA repair and recombination proteins [BR:
ljo03400
]
LJ_0649
Enzymes [BR:
ljo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LJ_0649
DNA replication proteins [BR:
ljo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LJ_0649
DNA repair and recombination proteins [BR:
ljo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LJ_0649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AAS09572
UniProt:
Q74HW8
LinkDB
All DBs
Position
complement(1713728..1714690)
Genome browser
AA seq
320 aa
AA seq
DB search
MSISVIQGVLRIPAAQEKIRQKGIEKPSFPDNYTLIDVETTGLSPYRDRITEMGGLKVRH
GEVVATFSELVKFPDSNKVPAFITKLNGIDETTIEEKGLPVQEAIKKYREFIGSDPIVGY
NVNFDLNFVYDLAEKYHLTVLNNDYVDVYRLARSFYPQEQHNRLLDCMHRLDIAETQEHR
GLDDCLDTKKVFDEFHKLFKQEHMLRAQEMVKTLDLTSEWPELVKQSQAFRSPFAHKNVV
IAGDLDVDEYELANAVKNLGGFIRDEVGQDTDYLLVGDHDFFRTDIVELNKARALKKQGQ
NIRIWSEQFFLNVLDNWARS
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagtatttcagttattcaaggtgttttacgaattccagcagctcaagaaaaaatacgt
caaaaaggcatcgaaaagccgagctttcccgataactataccttaattgatgtagaaact
actggccttagcccatatcgtgatcggattacagagatgggtggtttaaaggttcgccat
ggagaagtagttgcaactttttcagaattagtgaagtttcctgatagtaataaggtgcct
gcttttattaccaaattaaatggaattgatgaaacgacgattgaagaaaagggattacct
gttcaagaggcaataaagaagtatcgtgaatttattggtagtgatccaattgttggatat
aatgttaattttgatttgaattttgtctatgacctagctgaaaaatatcacttaactgtc
ttaaataatgactatgttgatgtttatcgtttagctcgtagtttttatccacaagaacaa
cacaatcggcttttagattgtatgcatcgattagatatcgcagaaactcaagagcatcgc
ggtttagatgactgcctagatacaaaaaaggttttcgatgaatttcataagttgtttaag
caagaacatatgcttagagcacaagaaatggtcaaaacactagatttaactagtgaatgg
cctgagcttgttaagcaaagccaagctttccgtagtccgtttgctcataaaaatgttgta
attgctggtgacttagatgtagatgaatatgaactagctaatgctgtaaagaatttgggt
ggctttattcgggatgaagttggtcaagatacagactatcttttagttggagatcatgat
ttcttcagaacggatatcgttgaattaaataaggcaagagcattaaaaaagcaaggtcaa
aatattagaatctggtcggagcaatttttcttgaatgttcttgataattgggcacgtagt
taa
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