Lactobacillus johnsonii NCC 533: LJ_0886
Help
Entry
LJ_0886 CDS
T00158
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ljo
Lactobacillus johnsonii NCC 533
Pathway
ljo03030
DNA replication
ljo03430
Mismatch repair
ljo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ljo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LJ_0886
03430 Mismatch repair
LJ_0886
03440 Homologous recombination
LJ_0886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ljo03032
]
LJ_0886
03400 DNA repair and recombination proteins [BR:
ljo03400
]
LJ_0886
Enzymes [BR:
ljo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LJ_0886
DNA replication proteins [BR:
ljo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LJ_0886
DNA repair and recombination proteins [BR:
ljo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LJ_0886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
DNA_pol_B_exo2
Motif
Other DBs
NCBI-ProteinID:
AAS08707
UniProt:
Q74K67
LinkDB
All DBs
Position
complement(789977..790510)
Genome browser
AA seq
177 aa
AA seq
DB search
MNFTAMDFETANSHPESACSLALVMVRNNEIVDRFYTVINPQMPFDGRNIKIHGITAEDV
KNAPTMAEVWPKIKKLYQPGMLVAAHNARFDCRVMEKSLARYNIPAPHYFAIDTLATSKA
FEPYLPNHKLDTVSEALNINLWHHHNALSDSEACAGILIEENKRVGDDPIKKMVKPI
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgaactttactgcaatggattttgaaacggcaaacagtcatccggaaagtgcctgttct
cttgctttagttatggttagaaataatgaaattgtggatcgtttttatacagttatcaat
ccacaaatgccttttgatggaagaaatataaaaattcatggcattacagctgaagacgta
aaaaacgctccaacaatggctgaagtctggccaaaaataaaaaaattatatcaaccagga
atgttagtagctgcccataacgctcgctttgattgccgcgtaatggagaaatcgctggct
cgctataatattccggcaccccactactttgcaattgatactttagcaactagtaaagcc
tttgagccctatcttcctaatcacaaactagatacagtctcagaagctttaaatatcaat
ttatggcaccaccataatgctttaagcgatagcgaagcttgtgcaggtattttaattgag
gaaaataaacgtgttggagatgatccaatcaaaaaaatggttaagcctatctaa
DBGET
integrated database retrieval system
