Lactobacillus johnsonii NCC 533: LJ_1203
Help
Entry
LJ_1203 CDS
T00158
Name
(GenBank) hypothetical protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ljo
Lactobacillus johnsonii NCC 533
Brite
KEGG Orthology (KO) [BR:
ljo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ljo03400
]
LJ_1203
Enzymes [BR:
ljo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LJ_1203
DNA repair and recombination proteins [BR:
ljo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LJ_1203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
DEAD
PDDEXK_1
Cellulase
AAA_30
AAA_16
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AAS09024
UniProt:
Q74JA6
LinkDB
All DBs
Position
complement(1130740..1134354)
Genome browser
AA seq
1204 aa
AA seq
DB search
MTKFTKEQNQAINDYGKDILVSASAGSGKTTVLVERVLKRILSGTPVSSLLIITFTKAAA
REMKERIKQKISDQIEKEPNNQFLRSQLLDVDTANISTIDSFCLDVIRRFYYVIDLDPQF
SVLTDETQAELLKERALHEIEIEYLEKNDQDFQDFYDNFSGDRDAEGARNLLLQLYNTVV
TEPNYEKFLNNLPNFYQVQDDLIESDLWQTQIKPLLIKEIKDLQTEIRQFFENPQMENPD
LVKVKENYDIFTSRLEQFLNALEDDHSYNEIRASLMNCKFEKNIRKSKKWSEESLETYQE
SQKLKSDLNDQLKKIFANFFVVEEKEQVNILKKSEKLVKTIVDAEKKLIKRFGQLKREQN
LIDYSDMEQFAFSILTTDTSNAHIAQEYYQEKFNEILIDEYQDVNALQENIIAAIKKKGQ
NNLFMVGDIKQSIYGFRQARPDLFLSKYHAYGQNDDSEKIVLSDNFRSTQRVTKTVNSLF
NPILTANFGGIDYKKEGQLQFGATYYPTDLPTASEYIFTDKKQTQASFEENFGDEMDFSE
IQMVIARIKQLKEENFQVWDRKTQLKRPLEYSDIAIITRTRSDNLQVMQEFAKADLPLFV
TDAQNYFQTFELVMIMNYLRLIDNPQQDIPLVAVLRSPLFNFKEPELAQIRVKTRSGNFY
NALTSFASVNSDLGQKCKNFLQQLESLRSFAATHRISELIWSIYERTHLLEIVTGLPNGQ
QRRVNLESLYERATSYESAGFKGLYQFISFIERMRKNQKDLAQPLLSDKADKAVKLMTIH
ASKGLEFPVVFVMGLGHKYQTRDLSGNFTISKDGLGLTIKEKDYRIDSLVKSLADVEKRQ
QMLEEEARILYVGLTRAQQKLILVASVSEMEAKQKKWESEIDQKTNILPLIRKINAQSPL
DFLGPKLEQKHEFDQTIEDMTLALEEQDKIYYLKFAVQSDIEEKDEQKDDTQKLSSKMND
VVKTLYNFEYPFADATKTTAYQSVSEIKKVFNDPMDTELENSRLISSSNRYLQPIDETPV
FLEKQKFTGAEIGTAMHLVLQYYDYQGDKTEINLEQEIEELVELGKLNPLMVPHLSKEAL
NWFVMSEFAAEFWQKPEKLHRESQFSSLVNASELFNDFSDSAAKILVHGTIDGYFETDEG
LILFDYKTDFVDKTHEEQAIDKIKKKYTGQLRLYEQALNEISENKKVIGKYLILLDARKV
VPVD
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
ttgacgaaatttactaaggaacaaaatcaagcaattaacgattatgggaaagatatccta
gtttcagcatccgctggttcaggaaagaccacagtattagttgaacgtgttttgaaacgc
attttatctggtacaccagtttcgtcgcttttgatcatcacttttactaaagctgctgct
cgtgaaatgaaggaacgaatcaagcaaaaaataagtgatcaaattgaaaaagagcctaat
aatcaatttcttcgtagccaattacttgatgtggatactgctaatatatctacaattgat
tctttttgtttagatgtaattagacgtttttattatgtaattgatcttgacccacaattt
agtgttttaactgatgaaacccaagctgagcttttaaaagagcgtgccctccatgaaata
gaaattgagtaccttgaaaaaaatgatcaagattttcaggatttctatgataatttttct
ggtgatagggatgcagaaggagctcgaaatcttttattgcagttgtacaatactgtagtt
actgagcctaattatgaaaaatttctcaataatttacctaatttttatcaagttcaagat
gatttaattgaatctgacctgtggcagactcaaattaaaccgcttttaataaaagagata
aaggatctacaaactgaaataagacagttctttgaaaatcctcaaatggaaaatccagat
ttagtgaaggttaaggaaaactacgatatctttaccagtcgtttagagcaattcttaaat
gctttggaagatgatcattcttataatgaaattcgagctagtctaatgaattgtaagttt
gaaaagaatattcgcaagtctaaaaagtggtcagaggaaagtcttgaaacttaccaagaa
agtcaaaagctaaaatctgatttaaatgatcaacttaagaagatctttgctaactttttt
gtagtagaagaaaaagaacaggtaaatattctcaaaaaatcagaaaaattagttaaaacc
attgttgatgctgaaaaaaaattaattaagagatttggtcaattaaaacgagaacagaat
ttaattgactatagtgacatggagcaatttgctttcagcattcttactaccgatacttca
aatgctcatattgcccaagagtattaccaagaaaaattcaatgaaatattaattgatgag
tatcaagatgttaacgctttgcaggaaaatatcattgcagctatcaaaaagaagggacaa
aacaacctatttatggttggagatataaaacaatctatttacggttttagacaagcacgt
cctgacttgtttttaagcaaatatcatgcttatggacagaatgatgatagtgaaaaaatt
gtcttatcagataattttaggtcaacacaaagagttactaagacagttaactctttgttc
aatccaattctaactgcaaattttggcggaattgattacaaaaaagaaggacaattacaa
tttggcgcgacttattatcctactgacttgcctactgcaagtgaatatattttcacggat
aaaaaacaaacgcaagcttcatttgaagaaaatttcggagacgaaatggacttcagtgaa
attcaaatggttattgccagaattaagcaacttaaggaagagaatttccaagtctgggat
cgaaaaacacagcttaaacgcccgctggaatattctgatattgccattattacgcgtact
agaagtgacaatttacaggtaatgcaagaatttgcaaaggcagatctacctttatttgta
actgatgctcagaactattttcaaacatttgaattagtgatgatcatgaattacttgaga
ttgattgataatccacaacaggacatccctctagtggcagtcttacgttcaccgcttttt
aactttaaagagcctgaattagcgcaaatcagggtcaaaactagatccggaaatttttat
aatgctttaaccagctttgcatcagtcaattcggatcttggtcaaaaatgtaaaaacttc
cttcagcaattagaatctctgcgttcatttgcggcaacccatcgaatttctgaattgatt
tggagtatttacgaaagaacccatctgttagaaattgtaactggcttgcctaatggacaa
cagcgtagagtaaacctagaatctctatatgagagagccacttcttacgaaagtgccggt
tttaaaggattatatcaattcattagttttatcgagcgcatgcggaaaaatcaaaaggat
ttagcacaaccacttttaagtgataaggctgataaggctgtaaaactaatgactatccat
gcttctaaaggtctcgaatttccggtagtgtttgtcatgggactaggtcacaagtatcag
acacgtgacttaagtggcaattttacgattagtaaagatggactagggttaacaattaaa
gaaaaagattatcgaattgattccctagttaaatctttagccgatgtcgaaaaaagacaa
caaatgcttgaagaagaagctagaatcttatacgttggtttaacacgtgctcaacaaaag
ctcatcttagttgctagtgtaagtgagatggaagctaagcagaaaaagtgggaaagtgaa
attgatcaaaaaacgaacatccttccattaataagaaaaatcaatgcccagtctccacta
gattttctaggacctaagctagaacaaaagcatgaatttgatcaaacgattgaagacatg
accttagctttagaagagcaagataagatatattacttaaagtttgctgtgcagtcagat
atagaagaaaaggatgagcaaaaagacgatactcaaaaattaagttctaaaatgaatgat
gtagtcaaaaccctttataattttgaatatccatttgcggatgccactaagactacagcc
tatcagtctgtttctgagataaaaaaagtatttaatgatcctatggatactgaacttgag
aattcacgtcttatttcttcaagtaatcgatatttacaaccaattgatgagactcccgta
tttttagaaaaacaaaaatttactggagcagagatcggaacagcgatgcacctagtttta
cagtattatgattatcagggtgataaaactgagataaatttagaacaagaaattgaagag
cttgtagaattaggtaaattaaacccattgatggtgccacatttatcaaaagaagcttta
aattggtttgtaatgagtgaatttgcggcagaattttggcaaaaaccagaaaaattacat
agagaaagccaattctcaagcttagtgaatgctagtgaactgtttaatgatttttctgac
tcagcagctaaaattctagttcacggaacaattgatggatattttgaaacagacgaaggt
ttaattttatttgactataaaactgattttgttgataaaactcatgaagaacaagctata
gacaaaattaagaaaaaatatactgggcaactacgtttatatgaacaagcattaaatgaa
atatcggaaaataaaaaggtaattggaaaatatttaattttgcttgacgcaaggaaagtg
gtcccagtagactag
DBGET
integrated database retrieval system
