Lactobacillus johnsonii NCC 533: LJ_1485
Help
Entry
LJ_1485 CDS
T00158
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ljo
Lactobacillus johnsonii NCC 533
Brite
KEGG Orthology (KO) [BR:
ljo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ljo03016
]
LJ_1485
Enzymes [BR:
ljo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LJ_1485
Transfer RNA biogenesis [BR:
ljo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LJ_1485
Prokaryotic type
LJ_1485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AAS09253
UniProt:
Q74IT0
LinkDB
All DBs
Position
complement(1354225..1355118)
Genome browser
AA seq
297 aa
AA seq
DB search
MLNGIVVVNKPRGVTSSDCVYKLRKILQIRKIGHAGTLDPEVNGVLPIAIGQATKLIELM
HEKPKSYIGSGMFGKATDSYDLDGTTTAEEKIVTPFTSDEIISGMKKLTGKIDQVPPIYS
AVRVNGKRLYEYARENIPVERPKRKVNIYSYELTQDPEYDPLEKTESFNFAIRCSKGTYV
RSLVNDLGEELGVPAVMTSLTRTSSSGFDLSQAVDLETIEKEIDYPEKWLQPIDSFFVDL
PQLQISPDQFKRVSNGASIKLNTTYAKVALVYNGHIKAIYQRQGKIYRPEMMLLKNE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgctaaatggaattgtagtagtaaataagccacgcggagtaaccagtagtgactgtgtt
tataaattacgaaaaattttacaaattagaaaaattggacatgcaggtacactggatcca
gaagtaaatggggtattaccgattgcaattggccaagccacaaagctaattgaattgatg
catgaaaaaccaaagtcatatattggaagtggaatgtttggtaaagcaaccgatagctat
gatttagatggaacaaccactgcagaagaaaagatagttactccatttacaagtgatgaa
attattagtggaatgaaaaaacttactggaaagattgatcaagttcctccaatatattct
gcggtccgtgttaatggtaaaagactttatgaatatgctcgagaaaatatcccagtagaa
cgtccgaaaagaaaagtaaacatttatagttatgaattaactcaagatccagaatatgat
ccactagaaaaaactgaaagttttaattttgctattcgctgttctaaaggaacctatgta
cgatccctagtaaatgatttgggagaggaattgggagttccagctgtaatgaccagtctt
actagaactagcagttcaggttttgatttaagtcaagcggtagatctagaaactattgaa
aaagaaatagattatcctgaaaaatggcttcaaccaattgatagctttttcgtagattta
ccccaacttcaaatatcaccagatcaatttaaaagagtttcaaatggagcaagcattaaa
ttgaataccacttatgccaaggtagctttggtttataatggacatataaaagctatttat
caacgacaaggtaaaatttatcgtcctgaaatgatgcttttaaaaaatgaatag
DBGET
integrated database retrieval system
