Lactobacillus johnsonii NCC 533: LJ_1490
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Entry
LJ_1490 CDS
T00158
Name
(GenBank) N utilization substance protein A-like protein
KO
K02600
transcription termination/antitermination protein NusA
Organism
ljo
Lactobacillus johnsonii NCC 533
Brite
KEGG Orthology (KO) [BR:
ljo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ljo03021
]
LJ_1490
03009 Ribosome biogenesis [BR:
ljo03009
]
LJ_1490
Transcription machinery [BR:
ljo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
LJ_1490
Ribosome biogenesis [BR:
ljo03009
]
Prokaryotic type
rRNA transcription factors
LJ_1490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
KH_1
KH_NusA_C
S1_2
Phytoreo_P8
Motif
Other DBs
NCBI-ProteinID:
AAS09258
UniProt:
Q74IS5
LinkDB
All DBs
Position
complement(1358834..1360054)
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AA seq
406 aa
AA seq
DB search
MSKEMVEAFATLEKEKGIKQEVIVDAIKAALVAAYKKNYNQAQNVEVVFDEKKGNFKVNA
IKTVVDEVQDSRLEVSLKDALEINRAYEVGDEIRFEVTPKDFGRLAAQTAKQVIMQRLRE
AEREHIISEYSQYKDEIVTGTVERRDNRFVYVKIGNVEAVMPHNDQLPGETYNPQDKVRV
LVTRVGSDSKGAQITVSRTAPDLVKRLFEQEVPEVYDGTVEIVSIAREAGDRTKIAVKSN
DSDIDPVGTLVGPKGARVQNIVNELGGENIDVVKYEDNPSDFIANALNPAEVIAVQFSGD
EDDKNALVIVPDYQLSLAIGKRGQNVRLAARLTGYKIDIKPESQVEFVDSEGDDVEADQE
TTNDNVSNEETPESIAEQIEDEPSDKFPNGEDVNSALNDDADKDEE
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagaaatggtggaagcctttgcaaccttagaaaaagaaaaaggcattaaacaa
gaagttattgttgatgcaattaaggctgctttagtagctgcatataagaaaaattataac
caagctcaaaatgtagaagttgtttttgatgaaaagaaaggcaacttcaaagttaatgca
attaagactgtagttgatgaagttcaagatagtcgtctcgaagtaagtttgaaagatgct
cttgaaattaaccgtgcttacgaagttggtgacgaaattcgttttgaagtaactcctaaa
gacttcggacgtttagctgctcaaactgctaagcaagttattatgcaacgtttacgcgaa
gctgaaagagaacatattattagcgagtactctcaatataaagatgaaattgttactggt
acagttgaaagacgtgacaatcgcttcgtttatgtgaagattggaaatgtagaggctgta
atgccgcataatgatcaactaccaggtgaaacttacaatcctcaagataaagttcgtgtc
ttggttactagagtagggtctgattcaaagggagcacaaattacagtttctagaacagca
cctgatttagtaaaacgtctttttgaacaagaagtaccagaagtttacgatggaactgtt
gagattgtatccattgctcgtgaagcaggcgatagaaccaagattgcagttaagagtaat
gattctgatattgatccagtcggtaccttagtaggaccaaagggagctcgtgttcaaaac
atcgttaatgaattgggtggagaaaatattgatgttgtaaaatatgaagataatccatct
gattttattgccaatgctttgaatccagcagaagtaattgcagttcaatttagcggggat
gaagatgataagaatgctttggtaattgtacctgattaccaattgtcattggccattggt
aaacgtggtcaaaatgtacgccttgctgctcgcttaactggctataagattgacattaaa
cctgaatcacaagttgaatttgttgattctgaaggtgatgatgttgaagcagatcaagag
actacaaatgataatgtctcaaatgaagaaacaccagaatctattgctgaacaaattgaa
gacgagccaagtgataagtttccaaatggagaagacgttaattcagcattaaatgatgat
gcagataaagatgaggaatag
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