Lactobacillus johnsonii NCC 533: LJ_1651
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Entry
LJ_1651 CDS
T00158
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ljo
Lactobacillus johnsonii NCC 533
Pathway
ljo03030
DNA replication
ljo03410
Base excision repair
ljo03420
Nucleotide excision repair
ljo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ljo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LJ_1651
03410 Base excision repair
LJ_1651
03420 Nucleotide excision repair
LJ_1651
03440 Homologous recombination
LJ_1651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ljo03032
]
LJ_1651
03400 DNA repair and recombination proteins [BR:
ljo03400
]
LJ_1651
Enzymes [BR:
ljo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LJ_1651
DNA replication proteins [BR:
ljo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LJ_1651
DNA repair and recombination proteins [BR:
ljo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LJ_1651
NER (nucleotide excision repair)
GGR (global genome repair) factors
LJ_1651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_2
HHH_5
Polysacc_deac_2
Imm9
DUF61
Motif
Other DBs
NCBI-ProteinID:
AAS09424
UniProt:
Q74IB4
LinkDB
All DBs
Position
complement(1525310..1527970)
Genome browser
AA seq
886 aa
AA seq
DB search
MAQKKLLLIDGNSVAFRAFYALYRQLDRFTSPDGLHTNAIFTFKNMLDAIMKQTNPTNVL
VAFDAGKVTFRTEMYQDYKGGRQKTPSELSEQLPVIREMLKDLGIKSYELKNYEADDIIG
TLSKMGEDAGYTVDIVTGDRDLTQLASDKTTVLITKNGVGDTEAYTPAHMKEVNGVTPTE
FIDMKALMGDSSDNYPGVTKVGPKTASRLIQKYGSIEELYEHVDEMKKSKLKENLINDKD
KAFLAKKLATIDRDSPVEVTLADTKLQEPNIEDLRNLYERLGFKKFLAELDVNGTTSNTP
ETEKYEYLELTKENIIELDKISEKEVTFYLAMLGDNYHLAPIEGFSLKVGNKIYVSKDPV
LLQENSLRQMLEDKTIKKNVFDIKRTYVGLHRLDIKAEGLDYDMLLASYLVNNENNSNDL
GEIAHLYDDYSVKTDLEVYGKGKKQAVPDDNDFFEHLAAKVAVIEKLKTPLLEKLKDHEQ
DDLYETIEIPVAFVLAKMEITGIKVEASVLNQLGNDFAVKLQELEHKIYQQAGEEFNLNS
PKQLGHILFEKLGLPPIKKTKTGYSTSVEVLEQLKMKSPIVSEILDYRQIAKIQNTYVKG
LLDCIQPDGRIHTRYLQTLTTTGRLSSVDPNLQNIPTKTEEGKQIRKAFVPSTKDGYIFS
CDYSQVELRVLAHVSGDEHMQEAFKSGYDIHAHTAMKIFHLDSPDEVTPLMRRHAKAVNF
GIVYGISDYGLSKNLGISRKQAKTFIENYFEQYPQIKNYMDEAIKKARENGYAETIMHRR
RYLPDIHSKNFNVRSFAERTAINSPIQGSAADIIKIAMINMQKKLDELHLKTKMVLQVHD
ELIFDVPKDELDTIKKIVPEVMQSAVKLDVPLIADSNWGHNWYDAK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaaagaaattacttttaattgacggcaactctgtggcctttcgtgccttttat
gctttataccgtcagcttgatcgttttactagtccagatggattgcatacaaatgcaatt
tttacttttaaaaatatgcttgacgcaatcatgaagcagactaatccaactaatgtatta
gttgcttttgatgcaggaaaagttacttttagaactgagatgtatcaagattataaaggt
ggtcgccaaaaaacgccaagtgaattgtcagagcaacttcctgtaattcgtgaaatgctt
aaagatcttggaataaagagttatgagctaaagaattatgaagctgatgatattattggg
acactttctaagatgggagaagacgctggatatacagttgatattgtaactggagatagg
gatctaactcagcttgcatctgataaaaccacagtcttaattactaaaaacggagttggc
gatacagaagcttatactccagcccatatgaaagaagttaacggtgttactccaactgaa
ttcattgacatgaaagctttgatgggggatagttcagataattatcctggtgtaactaag
gtcggcccaaaaactgcttctcgtctaattcaaaaatatggttctattgaagaactttat
gaacatgtagacgaaatgaaaaagtctaagctaaaagagaacttaattaatgataaagat
aaggcctttttagcaaaaaaattagctactattgatcgtgattcgccagtggaagtaact
ctagctgatactaaattacaagaaccaaatattgaagacttgcgtaatttatatgagcgt
ttaggatttaagaaattcttagctgagttagatgttaatggtacaactagtaacacacca
gaaacggaaaagtatgaatatcttgagttaactaaagaaaatatcattgagctagataaa
atcagtgaaaaagaagtaactttttatttagcaatgttaggtgataattatcatctagct
ccaattgaaggcttttctttaaaagttggtaataagatttatgtatctaaagatccagtt
ttgttgcaagaaaattcacttcgtcaaatgctagaagataagactatcaagaagaatgtt
tttgacattaaaagaacgtatgtaggtttacatcgactagatatcaaggcagaaggtcta
gactatgatatgcttcttgcttcatatttagttaataatgaaaataattcgaatgatctt
ggagaaatagctcatttatatgacgattattctgtaaagactgatttagaagtttacgga
aaaggtaaaaaacaagctgtacctgacgataatgatttctttgaacatttagcagctaaa
gtcgccgtaattgagaaattaaagactccacttcttgaaaaactaaaagatcatgaacaa
gatgatttatatgaaacaattgaaattccagtggctttcgtcttagcaaagatggaaatt
actggaatcaaggttgaagcatccgttttgaatcaattaggtaatgattttgcagttaag
ttacaagaactagaacataagatttatcaacaggctggcgaagaattcaacttgaactca
cctaagcagttggggcatatcctatttgaaaaattaggtttaccaccaattaagaagact
aagactggttactcaacatctgttgaagtattagagcaattaaaaatgaaaagtccaatt
gtttcagaaattttggactatcgtcaaattgctaaaattcaaaacacttatgttaagggc
ttgcttgactgcattcagccagatggaagaattcacactcgctatttgcagactttgact
acaacaggtcgtctttcttcagttgatcctaatttacaaaatattccaactaaaactgag
gaaggaaagcagattagaaaagcttttgttccttcaacaaaagatgggtatattttctct
tgtgattattctcaggttgaactaagagtgctagctcatgtttctggggatgaacatatg
caagaagcatttaagtcaggctatgatattcacgcccacaccgcaatgaaaatattccac
ttggactcacctgatgaagtaacgccattaatgcgtagacatgctaaagctgttaatttt
ggtatcgtttatggtatttcagactatggcttgtctaaaaacttaggcattagccgtaag
caggctaaaacttttattgaaaattactttgaacaatatcctcaaattaaaaattatatg
gatgaagcaattaaaaaagctcgtgagaatggctatgcagaaacaattatgcatagaaga
cggtatttaccagatattcattcaaagaacttcaatgtcagaagttttgcggaaagaact
gcaattaattctccaattcaaggatcagcagctgatattattaagattgccatgattaat
atgcagaaaaaacttgatgaactacatttaaagactaaaatggtcttacaagtacacgat
gaattgatttttgatgtgccaaaagatgaattagatacaattaagaaaattgttccagag
gttatgcagtcagctgtcaaattagatgttccactaattgcagattcaaattggggacat
aattggtacgatgcaaaataa
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