Lactobacillus johnsonii NCC 533: LJ_1674
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Entry
LJ_1674 CDS
T00158
Name
(GenBank) hypothetical protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
ljo
Lactobacillus johnsonii NCC 533
Brite
KEGG Orthology (KO) [BR:
ljo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljo03019
]
LJ_1674
Messenger RNA biogenesis [BR:
ljo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LJ_1674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AAS09447
UniProt:
Q74I92
LinkDB
All DBs
Position
complement(1545908..1546885)
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AA seq
325 aa
AA seq
DB search
MIKRLLDYNDGEDMNLVLLLKDSSLRTSKNGKQYLVLQFSDSSGTIRGNLWNASQQDADT
FSPGTIVELSGRREEYQDRPQIRIYDLRVVGPNEGYDLSQFVHSAPIKQKDLEEEINKRV
FEILNPTWNRIVRYLLKKWNKEFFSYPAGKSNHHAVRNGLAFHTVSMLRDAEGIANTYPQ
IDRSLLYAGCILHDMGKVIELSGPVATTYTAEGNLIGHLVLIDEQIMLAAHELKIDEHSE
DLMLLRHLVLSHHGLPEYGAAHRPVVLEAEVLHKIDDLDATVYAITNALQQTKPGEFTET
IKSQDNRRFYRPKNDDALDKATKLE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaaggttgcttgattataatgatggcgaagatatgaatttggttttacttcta
aaagattcaagtcttcgtactagtaaaaatggtaaacaatacttagttttacaatttagc
gattcaagtggcacaattagaggaaatctttggaacgctagtcagcaggatgcggatact
tttagtccaggaactatcgtggaattgagtggaagacgagaagagtatcaagatagaccg
caaataagaatttacgatttgcgagtagtgggaccaaatgaaggatatgatttaagtcaa
tttgttcattcagctccaattaaacaaaaagatcttgaagaagaaattaataaacgtgtt
tttgagatcttaaatccaacctggaatcgaattgtccgctacttacttaagaaatggaat
aaagagtttttctcatatccagctggcaaatctaaccatcatgccgtcagaaacggactg
gcattccatactgtttcaatgctaagggatgcggaaggaattgctaatacttatcctcaa
attgatcggtcacttctatatgcgggatgcattttacatgatatgggaaaggtaattgaa
ctatctggtcctgtagccacaacttatacggccgaaggaaatttgattggacacttagtt
ttaattgatgagcagattatgctagcagctcatgaattgaaaattgatgagcatagtgaa
gatttaatgctcttgcggcatttagttttgtcacatcacggcttacctgaatatggcgca
gctcatcgaccagtagtgctagaagctgaagttttacataaaattgatgatttagatgct
acagtttatgcaattactaatgctttgcagcaaactaagccaggagaatttactgaaacc
attaagtcacaagacaatcggagattttacagacctaaaaatgatgatgccttagataaa
gcaacaaaattagagtaa
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