Lactobacillus johnsonii NCC 533: LJ_1721
Help
Entry
LJ_1721 CDS
T00158
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ljo
Lactobacillus johnsonii NCC 533
Pathway
ljo03420
Nucleotide excision repair
ljo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ljo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LJ_1721
03430 Mismatch repair
LJ_1721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ljo03400
]
LJ_1721
Enzymes [BR:
ljo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LJ_1721
DNA repair and recombination proteins [BR:
ljo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LJ_1721
MMR (mismatch excision repair)
Other MMR factors
LJ_1721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AAS09492
UniProt:
Q74I48
LinkDB
All DBs
Position
complement(1605634..1607880)
Genome browser
AA seq
748 aa
AA seq
DB search
MSEETILAGLNPQQKKAVQCTEGPLLVVAGAGSGKTSVLTRRIAYLIEEKGVAPWNVLAI
TFTNKAASEMKERVQKLLGPAADSVWMSTFHALCVRILRRDAKKIGYSNNFSIADSAEQL
TLIKRIEKDLNINPKMYDPKAILGAISNGKNDLLTPKDFKEQAASPFEKVTAQVYSEYQH
RLKRDQIMDFDDLIMQTLVLFKKDKETLHYYQNKFRYILVDEYQDTNEAQYQLCVALAAQ
YKNICVVGDADQSIYGWRGANMENILNFEHDYQDDEVTTIKLEQNYRSTGHILDAANSVI
KNNLKRKPKKLWTDKGAGDKINYYRAQSGNDEALFIISKIKEEIKKHQRDYKDFAVLYRT
NAQSRNVEEALVKANIPYRIVGGHKFYDRKEIKDILAYLKVVANPADSMSFNRIINVPKR
GLGPTTMAKFNGFANDNDFTVEETFKNLSLAPITGRPARTLATFGTALKDAIEYSKTHGV
TGLTEKILADFGYKEALENEHTIEADTRLENLNEFLTVTKRFDDNYEPEDEDSTALGDFI
SEISLLSDQDDLENQDNQVALMTLHAAKGLEFPVVFLVGMEEGLFPLSRAVEDPSELEEE
RRLAYVGITRAEKKLYITNAFSRMMYGRPQRNQPSRFIDEIEDKDLEFVNPMPSNSVISV
PFAINRKKQANSHVYPPKMTIEEAKKATGAVGAEKKSWNVGDQVTHKAWGKGVVVKVNGT
GEDMELDIAFASQGVKRLLAAFAPIKKI
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaaacaattcttgcaggattaaatcctcagcaaaaaaaagccgtgcagtgt
actgaaggtccacttttagtagttgccggagctggtagtggaaaaacatcagttttaaca
cgtcgaattgcctatttaattgaagaaaagggcgttgcgccatggaatgttttagccatt
acttttactaataaggcagctagcgaaatgaaagaacgtgtccaaaagttattaggacca
gcagctgacagtgtttggatgtcaacttttcatgctttatgtgtccgtattttacggcga
gacgcaaaaaaaattggctactctaataatttttcaattgctgattctgcagaacaattg
acactaattaaacgaattgaaaaggatcttaatattaatcctaaaatgtacgatccaaaa
gcaattttaggcgctatttcgaatggaaaaaatgacttacttactccaaaagactttaag
gagcaagcagctagtccgtttgaaaaggtaacagcgcaagtatatagcgaatatcagcat
cgcttaaagcgtgatcaaattatggattttgatgatttaattatgcaaacgctcgtctta
tttaaaaaggataaagaaactttgcattattatcaaaataaattccgctatattttagta
gacgagtatcaggatacaaatgaagcacagtatcaactttgtgttgctttagctgctcaa
tataaaaatatttgcgttgttggggatgcagatcagtcgatctatggttggcgcggagct
aacatggaaaatattcttaattttgagcatgactatcaagatgatgaagttactactatt
aaattagagcaaaactaccgttctactggccatattcttgatgcagctaactcagtaatt
aaaaataatctgaaacgtaaacctaagaaactttggacggataaaggcgctggcgataaa
atcaattattaccgtgctcagagtggaaatgatgaagcactgtttatcatttcaaagatt
aaagaagaaataaaaaaacatcaaagagactacaaggattttgccgttctttatcggaca
aatgctcaatcacgtaacgtcgaagaagccctagttaaagctaatattccgtatcggatt
gttggaggacataagttctacgaccgaaaagaaattaaagatattttggcttatttaaaa
gttgtcgcaaatcctgctgattcaatgagtttcaaccgaattattaatgtaccaaaacgt
ggtttggggccaactacgatggctaagtttaacggttttgctaatgataatgactttaca
gtagaagagactttcaagaatttgagcttagcaccaattacgggtcgcccagctagaacg
ctagctacttttggaacggccttaaaagatgcaatcgaatatagtaagacgcatggtgta
acaggtttaacggaaaaaatattagctgatttcggctacaaagaagctttagaaaatgaa
cacacaattgaagcagatactagattagaaaacttaaatgaatttctgactgttactaag
cgttttgatgataattatgagcccgaagatgaagattcaacagctttaggtgattttatt
tcagagatctcattattaagtgatcaagatgatttagaaaatcaagataaccaagttgca
ttgatgactcttcatgccgctaagggactagagtttccagtggtcttcttggttggaatg
gaagagggactcttcccactttcaagagcagtagaagatccaagtgaacttgaagaagaa
cgtcgactagcatatgtaggaattacacgagctgaaaagaaactctacataaccaatgct
ttttctagaatgatgtatggccgtccgcaacgtaatcaaccatcacgctttattgatgag
attgaagataaggatttagaatttgttaacccaatgccatctaattctgtcatctctgtt
ccctttgctattaatagaaagaaacaagctaactctcatgtttaccctccaaagatgaca
attgaggaggctaagaaagcaactggtgcagttggagctgagaaaaagtcctggaatgtt
ggtgatcaagttacacataaagcatggggaaaaggcgttgtagtcaaagttaacggtact
ggtgaagatatggaattagatattgcctttgctagccaaggagtgaaacgccttttagct
gcctttgcaccgattaaaaagatataa
DBGET
integrated database retrieval system
