Lactobacillus johnsonii NCC 533: LJ_1855
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Entry
LJ_1855 CDS
T00158
Name
(GenBank) probable tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
ljo
Lactobacillus johnsonii NCC 533
Brite
KEGG Orthology (KO) [BR:
ljo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ljo03016
]
LJ_1855
Transfer RNA biogenesis [BR:
ljo03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
LJ_1855
Prokaryotic type
Methyltransferases
LJ_1855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
GTP_EFTU
Ras
Roc
AAA_22
DUF7195
ABC_tran
Csa3_N
AAA_16
Maf1
DUF1307
Motif
Other DBs
NCBI-ProteinID:
AAS09799
UniProt:
Q74H94
LinkDB
All DBs
Position
complement(1989261..1990646)
Genome browser
AA seq
461 aa
AA seq
DB search
MAQVLTQFDTIAAISTPIGEGGISIVRLSGEDAVAIANKLFKGADLTQVPSHTIHYGHIV
DPKTKDVVDETMVSVLRAPKTFTREDMVEINCHGGMIVTNDILQLLLANGARMADPGEFT
KRAFMNGRIDLTQAESVMDIVRAKTDKSRQVAMTQLAGGLLDKIRTMRQELLDTMAHEEV
NIDYPEYDMDDLTSQEMKKKAEEVSKQIDQLLKTAQEGKIIRNGLATAIVGRPNVGKSSL
LNYLTQDDKAIVTDIAGTTRDTLEEYVSVKGVPLKLIDTAGIHHTEDKVEKIGVERSKKA
IAEADLVLLLLDASQDLTDEDKNLLNLTANKKRIIILNKQDLGTKISQEMIREITDNPII
VTSILKQENMAALENAIEQLFFSGIENSQNQILVTNQRQAGLLAKAKQSLEDVVNGIDDA
MPLDLVQIDLKNAWDTLGEITGESAPDELITQLFSQFCLGK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagtattaacacaatttgatacaatcgctgcaatttctactcctattggcgaa
ggaggtatatcaattgttcgtctatctggtgaagatgcagtagcgattgctaataaactt
tttaaaggagcagatttaactcaggttccctcacatacaattcattatggacatatcgtt
gatcctaaaactaaggatgttgtagacgagacaatggttagtgtattacgcgcaccaaaa
actttcactcgagaagatatggttgaaatcaattgtcatggtggaatgattgtaactaat
gatattttgcagctacttttggcaaacggtgctcgaatggctgatccgggtgaatttact
aagcgcgcctttatgaatggtcgtattgacttgacacaagctgaatctgtaatggatatt
gttcgggctaagacggataagtctcgtcaagttgctatgacacaattagctggtggattg
ttagataaaatcagaacaatgcgtcaagaacttttagatacaatggctcatgaagaagtg
aatattgattatccagaatatgatatggacgatttaacttctcaagaaatgaagaagaag
gccgaagaagtttcaaagcaaattgatcaattgctaaaaacagctcaggaagggaaaatt
atccgtaatggtctagcaacggctatcgtgggaagaccaaatgttggtaaatcctctctt
ttaaattatttaacgcaggacgataaggcaattgttactgatattgcgggaacaacaaga
gatacacttgaagaatatgtttctgttaaaggcgtaccgctgaagctgattgatactgct
gggattcaccatacagaagacaaggtcgaaaaaattggagttgaacgttcaaagaaagct
atcgctgaagctgatttggtgcttttacttctggatgcaagtcaagatttaacagacgaa
gataaaaatttattaaatttaactgctaataaaaaacgaattatcattttaaacaaacaa
gatctaggcacaaaaatttcccaggaaatgataagagaaattactgataatccaattatt
gtaacttcaatcttaaagcaagaaaatatggctgcgcttgagaatgcaattgagcaatta
ttctttagcggaatagaaaattcacaaaatcaaatcttggtgacaaatcaaagacaagct
ggtttattagccaaagcaaagcaatctttagaagacgttgtcaatggaattgatgatgca
atgcctttagatttggttcaaattgatctcaaaaatgcttgggatactttgggtgaaatt
actggtgaaagtgcacctgatgaattaattacccaattatttagtcaattctgtcttgga
aagtag
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