Liolophura japonica (common chiton): 135461525
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Entry
135461525 CDS
T09976
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ljp03041
]
135461525
Enzymes [BR:
ljp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135461525
Spliceosome [BR:
ljp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
135461525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
135461525
NCBI-ProteinID:
XP_064594730
LinkDB
All DBs
Position
1:34451771..34458845
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AA seq
715 aa
AA seq
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MSFRDRGFDSSGRGDRKGFGGGGSRFGGSSSYGGGGGSRFGGSSGGFSGGRGGGFGGRDR
MNKNSQPGERLRKPKWDMSRLPKFEKNFYVEHPNVTRRTTQEITEYLNAREITLKGRDVP
KPIFQFNEANLPEFVLHAIAAQGWKEPTAIQCVGWPFALSGRDCVGIAQTGSGKTAAFIM
PALVHISHQPYLERGDGPICLVLVPTRELAQQVMEVAVMFGKPARVRSTCVYGGAPKGPQ
IRELERGAEICIATPGRLIDFLEAGKTDLRRCTYLVLDEADRMLDMGFEPQIRKIVEQVR
PDRQVLMWSATWPKEVKTLAEDFLTDYLHVNIGAQQLHANHNILQIVDVCQDTEKDYKLV
KLLEEIMGEKENKTLIFTETKRRADDLVRRMKRDGWPALCIHGDKSQPERDWVLSEFRSG
RAPILVATDVASRGLDVSDIKFVINFDYPCSSEDYVHRIGRTARSTNTGTAYTFFTPGNM
KQVNDLVSVLREANQVINPKLLQLAETAGRFGGKGRSRYRQGGFGGRDSGRGGYGGGSRG
SYGNSGRDRSSSSRFGSSSDKGGYSQGSSGRGSYDRGSSQSYGQSSGYGSSGTSQGGSYG
SGSQSYGSQGHQSKFSQGGQYSQSQYSGQYGQSSNYNQANGYKSNVSSSSTTSGQAAPKD
MAALQNMAAQYSNWMKTSSHQPPPPPSNPPLPKGAPPPPPQPPKFPPPPGGNYKY
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcagagaccgtggttttgattccagcggacgaggggacaggaaaggtttcggg
ggtggtggttcacgatttggaggcagcagtagttatggcggcggaggaggatcgagattt
ggtggaagtagcggtggattcagtggaggacgaggtggtggatttggtggccgagatcga
atgaataaaaacagccaacccggtgaaaggctaaggaagcctaagtgggatatgtccagg
ctgcccaaatttgagaagaacttctatgtcgaacatcccaatgtgacgcgaaggacaaca
caagaaatcacagaatatctaaatgctagagaaatcaccctcaaaggcagagatgttcca
aaacccattttccagtttaatgaggcaaatttgccagaatttgttctgcatgcaattgct
gcccagggatggaaagaacccacagccattcagtgtgttggctggccatttgccctgtcc
ggaagagattgtgttggaattgctcagacaggatctggtaaaaccgctgcgtttataatg
ccggctcttgttcatatatctcatcaaccatatctagaaagaggagatggaccaatatgt
ttagttctggtgcccacacgagagcttgcccaacaagtaatggaagtagctgtcatgttt
ggaaaaccagcaagagtacgcagtacatgtgtatatggaggtgcaccaaagggaccacag
atcagggaattagaaagaggtgcagagatctgcattgctacacctggtcgactaatagat
tttctagaggcaggtaaaactgacctacgcagatgtacatacttagtgctggatgaagca
gacagaatgttggacatgggatttgaacctcagattcgcaaaattgtggaacaagtcagg
cctgacagacaagtgctcatgtggagtgctacatggcccaaagaagtaaaaaccttggct
gaggatttcctcacagactaccttcatgtgaacattggtgcccaacagttgcatgcaaac
cacaacattcttcaaattgtagatgtttgccaagacacagagaaagactataagttggtg
aaattgttggaagagattatgggtgagaaagagaacaaaacattaatattcacggaaacc
aagagaagagcagatgatctggtcaggcgaatgaagagagacggatggccagcattgtgt
atccatggagataaatctcagccagagcgtgattgggtgttgagtgaattccgatctggt
cgtgctccaatcctggtggccacagatgttgcgtcacgtggtttagatgtgtcagatatc
aaatttgtcataaacttcgactacccgtgctcatctgaggactatgttcaccgcattggt
cgcactgcccgaagcaccaatactggcactgcctataccttcttcacccctggtaacatg
aaacaagttaatgacttggtctctgtcctgagggaggccaaccaagtgataaacccaaag
ctactccagttggcagagactgctggacgattcgggggtaaaggtcgcagtcgctacagg
cagggtgggtttggtggccgagattctggaagaggaggatatggtggtggcagccgcggc
tcctatggcaacagtggtagggaccgcagctcaagcagtcgttttggtagttcatcggat
aagggagggtattcccaggggtcctcaggcagaggtagttacgatagagggtcatctcag
agttatggacagagttcaggctacggctcctctggaacgtcacagggaggctcgtatggc
tcaggttcacaaagttatggctcccagggtcatcagagtaagtttagccagggaggtcaa
tatagccagtctcagtacagtggtcaatatggtcagtcatccaactacaaccaggccaat
gggtacaagtctaatgtcagctccagctcgacaacttctggccaggcagctcccaaagac
atggctgctctgcaaaatatggctgcccagtacagtaactggatgaagacgtcctctcat
cagcctcctccacccccatctaatccccctctaccaaaaggtgctcctccacctcctccc
cagccccctaagttccctccccctcctggaggcaattacaaatattga
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