Liolophura japonica (common chiton): 135462132
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Entry
135462132 CDS
T09976
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03082
ATP-dependent chromatin remodeling
ljp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135462132
03083 Polycomb repressive complex
135462132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ljp03036
]
135462132
Chromosome and associated proteins [BR:
ljp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
135462132
Histone modification proteins
HAT complexes
HATB complex
135462132
HDAC complexes
Sin3A-HDAC complex
135462132
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
135462132
PRC2.2
135462132
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
135462132
Heterochromatin formation proteins
Other heterochromatin formation proteins
135462132
Chromatin remodeling factors
NuRD complex
135462132
NuRF complex
135462132
NuRF complex (fruit fly)
135462132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
eIF2A
Beta-prop_RIG_1st
Beta-prop_SPT8
MIOS_WD40
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
135462132
NCBI-ProteinID:
XP_064595571
LinkDB
All DBs
Position
1:53115122..53131822
Genome browser
AA seq
437 aa
AA seq
DB search
MTEKDGEGFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGK
DYSLHRLILGTHTSASLSQNPYRSDEQNHLLIASVQLPNDNAQFDASHYDSEKGEFGGFG
SVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPSGECNP
ELRLKGHQKEGYGLSWNPNLNGHLLSASDDHTICLWDITSTPKEARVIEADTIFTGHTSV
VEDVAWHLLHVSLFGSVADDQKLMIWDTRSANTNKPSHTVDAHTAEVNCLSFNPYSEFIL
ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK
IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPTEPWVICSVSEDNIMQVWQMAENIY
NDEEPDTPAGDLEQTAS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgacagagaaagacggagaaggatttgatgatgctgtggaggagagggtaatcaatgaa
gagtacaagatatggaagaagaacaccccgtttctctatgatctggttatgacacatgca
ttggagtggcccagtcttactgcccaatggctccctgatgttaccaggcctgagggaaaa
gattactctcttcacagactcattttagggacccacacgtctgcttctttatcccaaaat
ccatacaggtcggatgagcagaaccatctgcttattgcgtccgttcagttacctaatgac
aatgcccaatttgatgcctcacattatgacagcgaaaaaggagaattcgggggatttggt
tcggttagcggaaagatagagattgagatcaaaataaaccatgaaggagaagtaaaccgt
gctcgatatatgccccagaatccctgtgtcattgccacaaagaccccgtcaagtgatgtg
cttgtgtttgactacacaaaacacccctccaaaccagatcccagtggtgagtgtaaccca
gaactgcgattgaagggacatcaaaaggaaggatatgggttgtcctggaatccaaatctg
aatggacatcttctaagtgcttctgatgatcatactatatgtttatgggatattacatca
actccaaaagaagcacgagtaattgaggcagatacaatttttacaggacatacatcagtt
gtggaggatgtggcttggcaccttctgcatgttagtttgtttggatctgtggcagatgac
cagaaacttatgatctgggacacaagatcggccaacacaaacaaaccaagccatactgtg
gatgctcacacagcagaagtcaattgcctttcctttaacccctatagtgaatttattctg
gccacaggctctgcggacaaaacagttgcgctctgggatctacgaaacctgaaattaaaa
ctccattcctttgaatcacataaagacgaaatatttcaagttcagtggtctccccataac
gagactatcctggcctctagtggcacagacagacggctgcacgtgtgggacctgagtaaa
atcggtgaagagcaatcggctgaggatgctgaagatggacctccagagcttctgtttata
catgggggacacactgctaagatatcagacttttcctggaaccccacagaaccatgggtg
atctgttctgtgtcagaggataacatcatgcaggtttggcagatggcagaaaatatttac
aatgacgaggaacccgacaccccagctggagatttggaacaaactgcatcctag
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