KEGG   Liolophura japonica (common chiton): 135462680
Entry
135462680         CDS       T09976                                 
Name
(RefSeq) superkiller complex protein 8-like
  KO
K12602  WD repeat-containing protein 61
Organism
ljp  Liolophura japonica (common chiton)
Pathway
ljp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ljp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    135462680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ljp03019]
    135462680
Messenger RNA biogenesis [BR:ljp03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     135462680
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd WD40_Gbeta WD40_MABP1-WDR62_2nd WDR55 EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_ACSF4 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_VPS8 WD40_RFWD3 NBCH_WD40 Tricorn_2nd RMC1_N Beta-prop_WDR41 Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_Nup120_160 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_NUP159_NUP214 KNTC1_N Cytochrom_D1 WDR54 Beta-prop_DCAF12 PEP5_VPS11_N Beta-prop_DCAF4 DUF7899 Beta-prop_IFT122_2nd CFAP43_N VID27
Other DBs
NCBI-GeneID: 135462680
NCBI-ProteinID: XP_064595974
LinkDB
Position
2:complement(1080784..1103707)
AA seq 302 aa
MYSIIFKQEQAHEDSIWTCAWAKSEKDDHENIVTGSVDDKVKVWRWTDEKLELKHVLEGH
QLGVVSVDMDNTGTLIASSSLDSHVKIWDVETGNQAKSIDAGPVDAWTIAFSPDSRFLAT
GSHNGKVNLFGVDTGRKQTSMDTRGKFILSIAYSPDGRYIACGAIDGIVNIFDISTGKLL
HTLEGHAMPIRSITFSPDSQLLVTGSDDSHIKIYDVHQAQLAGTLSGHGSWVLSVAFSSD
NTHFASCSSDKTVKVWEASTRTCVHTFYDHLDQVWSARFSSNGSKLTSVSDDRAIHIYDC
PT
NT seq 909 nt   +upstreamnt  +downstreamnt
atgtattccattatatttaagcaagaacaagcacacgaagacagcatctggacgtgtgcc
tgggcaaagagtgaaaaagatgatcatgaaaacattgtgactggctcggtggatgacaag
gtcaaggtctggagatggacagatgagaagttagaactgaaacatgtgcttgagggacat
cagctgggcgtggtctctgtggatatggacaacacgggcacattgatagcctccagtagc
ttagacagtcatgtgaagatttgggatgtggaaacaggtaaccaggccaagagtatagat
gctgggccagtggatgcatggacgatcgccttctcgccagattccaggtttctggctaca
ggaagtcacaacggaaaggtgaacctgtttggtgtggacacggggcgaaaacagacttcc
atggacactaggggaaagtttatactgagtatagcctattctcccgacggtcggtacatt
gcttgtggcgccatagatggaatcgtcaacatttttgacatctctacaggaaaacttctg
cacacattagaaggtcatgccatgcccattcgttccatcaccttctccccagattcacag
ctgcttgtcacaggctcggacgactctcacataaagatctatgacgtgcaccaggcccag
ctggcaggcactctctcaggtcacggctcttgggtcctaagcgtggccttcagtagtgac
aacacacactttgcttcctgctcctcagacaagacagtcaaggtatgggaagcctccacc
aggacctgtgtacacaccttctatgaccacttagaccaggtgtggagtgcccgattcagt
agtaacgggtccaagttaacatctgtgtcagacgacagagccattcacatctacgactgt
cccacatga

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