Liolophura japonica (common chiton): 135462699
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Entry
135462699 CDS
T09976
Name
(RefSeq) LOW QUALITY PROTEIN: U4/U6 small nuclear ribonucleoprotein Prp3-like
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135462699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ljp03041
]
135462699
Spliceosome [BR:
ljp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
135462699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
ErmC
Motif
Other DBs
NCBI-GeneID:
135462699
NCBI-ProteinID:
XP_064595990
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Position
2:complement(16395931..16427418)
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AA seq
654 aa
AA seq
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MALSRKEQDELRPLLDITVQKFLGFSEPTLVTASLNCVDSGYDKRKTVDKLSTILDDTQA
SKFADKLFAVLDEYRASNKVSRSKRRKDDREEGTEVKKRRFHDDESVAIPGPGNSSPGQL
TADKIKEMMAAAQRMIHDRKVQLGAPLVPKLPTQPVKEPGIPPLSQTQALMSDAVEKAKR
AAELQSRIQSQLAGLNSAGFSIPTQPAVKVIPQHDQSKPSPLILDEQGRAIDVTTGQAIQ
LQHHTPTLKANIRAKRREQFKGLIEKPPEEFTETKYFDPRVSLKPTQRQKRGFKFHEVGK
FQQIASRLRTKAQLDKLQNEIAQAAKKTGIASAAKLATIAPKKEIKEGDVPWVEWWDEFI
LRNESYEAMSLVTDQNSEGDIEGITNLIEHPIQMKPPADPTTKVTIPVYLTRKERKKLRR
QNRQENQKELQEKIRLGLEPPPEPKVRMANLMRVLGTEAVQDPTKVEAHVRAQMKKRQKA
HEEANAARKLTVEQRRDKKIKKIKEDTTLGVHVAVYRVRDLSNQAKKFKVEANANQLFLT
GIVILFKECNVVVVEGGPKQQRKFKRLMLHRIKWAEEKRSKDDDDSDAEEDSSKIRRCVL
VWEGTTKNRAFSEIKFKQCPTESFAREQFKKCGVEQYWDLAYSGAVMETAGEEL
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcattgtcgagaaaggagcaggatgagttacgtcccctgcttgacatcacagtacag
aagttcctgggttttagtgagccaacactggtaacggcatctctgaactgtgtggatagc
ggctatgacaaacgcaaaacagtcgacaagttgtctacgattcttgatgacacccaagcc
tcaaaatttgcagacaaactctttgcagtgttagacgagtacagggccagtaataaagtg
tcgaggagcaaacggaggaaggatgatcgtgaagaagggacagaggttaagaagaggcgt
ttccatgacgacgagagcgtggccatccccggtccagggaattctagccctggtcagctg
acagcagacaagataaaggagatgatggcagctgcccagagaatgattcatgaccgtaag
gttcagctgggggcccctctcgtcccaaagcttcccacacagcctgtaaaggagccaggg
atcccaccactcagccagacgcaggcgttgatgagtgacgctgtggagaaggccaaaaga
gcagcagagttgcagtccagaatacagtcccagctagccggcctcaactctgctggcttc
tccatacctacacagccagccgtgaaagtaattcctcagcatgaccagtcaaaaccctcc
cctcttatcctggatgaacagggtcgtgccatcgacgtgacaacgggacaggccattcag
cttcagcaccacacacccaccctcaaggccaacattcgtgccaaacgccgtgaacagttc
aaaggtcttattgagaaaccacctgaggagttcacagagaccaagtatttcgaccccaga
gtcagtctgaagcccacacagcgacagaagcgagggttcaaattccatgaggttggaaaa
tttcagcagattgcatcacgattaagaacaaaggcacagctggacaaattacagaacgaa
atcgctcaagctgccaagaaaacagggattgcatcggctgctaaacttgcgaccatcgct
cctaaaaaggaaatcaaggaaggtgatgtaccctgggtggaatggtgggacgaattcata
ctgagaaatgaatcgtatgaagccatgtctttggtaacagaccaaaacagtgaaggcgac
atagagggcatcaccaacctcatagaacatcctatacagatgaagcctccagctgatcct
acgacaaaggtgacaatacctgtgtacttaacgaggaaagagagaaaaaagttacgtcgc
cagaatcgacaggagaatcagaaagagctccaggagaagatcagactgggattagaacct
cctccagaacctaaagtgagaatggccaacttgatgagagtcttagggacagaggctgtt
caggatcctaccaaagtggaggctcacgtcagggcgcagatgaaaaaacgacagaaagcc
catgaagaagctaatgcggccagaaagttaacagtagagcagaggcgagataaaaagatc
aagaagattaaagaagacacgacgttaggggtacacgtggctgtttatagagtacgagat
ctgagtaaccaggcgaagaagtttaaagtagaagctaatgctaatcagctcttcctcacc
ggtattgtgattctctttaaggagtgtaacgttgttgttgttgaaggaggtccaaagcag
cagaggaaattcaagaggctgatgttacacaggatcaaatgggcggaggagaaacgaagc
aaagacgatgatgatagtgatgcagaagaggactcgagtaagatccgtagatgtgtgctt
gtttgggagggcaccacaaagaacagagcgttctcggaaataaaattcaagcagtgtccc
acagagagctttgctagagaacagtttaaaaagtgcggagtagaacagtactgggatttg
gcgtatagcggagctgtcatggaaactgcaggggaagaattatga
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