KEGG   Liolophura japonica (common chiton): 135462787
Entry
135462787         CDS       T09976                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
ljp  Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:ljp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ljp03041]
    135462787
Spliceosome [BR:ljp03041]
 Complex B
  Other components
   Complex B specific factors
    135462787
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_CDC20-Fz WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_WDR75_1st LisH_TPL NBCH_WD40 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st Ge1_WD40 WD40_MABP1-WDR62_1st Beta-prop_NWD2_C Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_VPS8 Beta-prop_EIPR1 LisH_WDR26 Beta-prop_BBS7 Beta-prop_DCAF12 Beta-prop_IP5PC_F BBS2_Mid PROPPIN Beta-prop_WDR11_2nd TFIIIC_delta VPS8_N WD40_like Beta-prop_LRRK2 WDR54 Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 135462787
NCBI-ProteinID: XP_064596117
LinkDB
Position
2:12540181..12556935
AA seq 513 aa
MAVEIESADVVRLIEQYLKENNLMRTLTMLQEESGISLNTVDSVDSFVTDINSGHWDTVL
QAIQSLKLPDQKLIDLYEQVVLELIELRELGAARSLLRQTDPMIMMKQTQPDRYVHLENM
LARSYFDPREAYLEGQTKEKRRAAIAQALAGEVNVVPPSRLLALLGQALKWQQHQGLLPP
GTSIDVFRGKAAVREQEEEKYPTQLSKTIKFGQKAHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLRYQANDNFMMMDDAVLCMCFSRDSEMLATGAQDGKIKVWKILTGQCLR
RFDKAHSKGITCINFSKDNSQLLSASFDQTIRIHGLKSGKTLKEFRGHTSFVNDAIFTLD
AHHILSASSDGTIKVWNVKSTETQNTFKSLGGTVGADITVHSVHLLPRFADQFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCATVSPRGEWIYCVGEDFVLYCFSATTGKLERTL
TVHDKDVIGMSHHPHQNMIATYSEDGMLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atggcggtggaaattgaatctgcagatgttgttcgtctgattgagcagtacctgaaggag
aataacctgatgagaacccttaccatgcttcaggaggaaagtgggatctcactgaatacc
gtggactctgttgatagttttgtgacggacatcaacagtggacactgggacacggtgcta
caggctatacagtctctcaaactgcctgaccagaaactcattgatctgtatgagcaggtg
gtattggagctgatagagctgcgtgagctgggtgcagcccgatcccttctccgtcagact
gaccctatgataatgatgaaacagacgcagcctgacagatacgtccatctggagaacatg
ttggccaggtcctactttgatccaagggaggcgtacttggagggtcagacaaaggagaag
cggcgtgctgcgattgcacaggctctggcaggggaggtaaatgtggtccctccctcccgt
ctgctggcattgctgggacaggccctcaagtggcagcaacatcaaggtctacttccccca
ggtaccagtattgatgtgtttaggggaaaggcagctgtgagagagcaggaggaggagaaa
tatcccacacaactcagtaagactatcaagtttgggcagaaggctcacgtggaatgtgca
cgattttctcccgacggtcagtacctagtaacgggatctgtggatggctttatagaagtg
tggaactttacaacagggaagatcaggaaagatctgcgctaccaggccaatgataacttc
atgatgatggacgatgctgtgctatgcatgtgcttcagcagagactcggagatgttagcc
acaggcgcacaagacggcaaaataaaggtctggaaaatcttgactggtcagtgtctgcga
cgttttgacaaagctcactctaaagggatcacatgtatcaacttctccaaagacaacagt
cagctgctgagtgcttcctttgaccagactatcagaattcatggcctgaagtctgggaaa
actctgaaggagtttcgaggtcacacatcctttgttaatgatgccattttcaccttagac
gcacaccacattctgagtgcgagctcagacgggactataaaagtgtggaacgtgaagtcc
acagagacacagaacacgtttaagtcattgggaggcacagtgggggccgacatcactgtt
cacagcgtccatttactgccccgatttgccgaccagtttgtcgtctgtaaccggtcaaac
acagtcgttatcatgaacatgcagggacagattgtgcgtagtttctccagcggtaagcgt
gagggtggggactttgtttgtgccacggtatcaccccgtggggagtggatctactgtgtg
ggggaagattttgtcctctactgcttcagcgctaccacgggcaaactcgagaggacactc
acggttcatgacaaagacgtcatagggatgtcacaccatcctcatcagaacatgatcgcc
acgtactcagaggatggaatgctcaaactatggaagccttga

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