Liolophura japonica (common chiton): 135463383
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Entry
135463383 CDS
T09976
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03030
DNA replication
ljp03410
Base excision repair
ljp03420
Nucleotide excision repair
ljp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
135463383
03410 Base excision repair
135463383
03420 Nucleotide excision repair
135463383
03430 Mismatch repair
135463383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ljp03032
]
135463383
03400 DNA repair and recombination proteins [BR:
ljp03400
]
135463383
DNA replication proteins [BR:
ljp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
135463383
DNA repair and recombination proteins [BR:
ljp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
135463383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
AAA_14
AAA_22
AAA_16
AAA_33
AAA_30
PTCB-BRCT
nSTAND3
Rad17
AAA_19
RNA_helicase
AAA_7
RuvB_N
BRCT_2
AAA_5
AAA_17
AAA_18
Motif
Other DBs
NCBI-GeneID:
135463383
NCBI-ProteinID:
XP_064596712
LinkDB
All DBs
Position
3:complement(13438205..13469675)
Genome browser
AA seq
1135 aa
AA seq
DB search
MDIRKFFGSPPVKKASGLEKVKEANNNNNSIPAKKADKNSSAKHRDERKNRDKSEDRKGD
KESENEDRKRDKKSRNASEEFTKVTDKEEKMNTRKKRKHSSDKESSAKKKPIQVTLGDSD
DEFDEVIKKRKSKAGRRKGIVYDSDSSAEEDPVPKKSKRKSSEYQSVVIVDSDEDCSRKT
RASPLKAFMKKTPSRPVAEVKKKVEEQTKRTPVSAADFFGGGSVKRVDRKPASKRKLEDD
SKPSNNVDDEIHEDADFEKTLEQLDEQSQKSKKTKTESLSSPPKKETSPSKPSLSNRLSS
LAKSSKVMVEDTPEKTKAAPVNQRSSPRKSVVTPKKHETPNKSETKKTSPGTNAGPASAK
TPSPGKSPVERKGSVXYRNYLNREGPKSLGSKEVPEGEPNCLEGLTFVITGVLESFERDE
XKSLLEKYGAKVTQSLSKKTSYVVVGRDAGASKLSKAEQFKTKQLDEDSMLELIRTLPGK
KSKYEIQAEAELKKEKSKTPAPSTPKVEEKLQAFKSSSSKNLQKIETPSKSASVKEEKSV
SSDQSEPSLLWVDKYKPTSLKKIIGQTGDKSNAVKLIHWIRNWHKNRALGKKPSGGFFGK
DDGSGFRAALLSGPPGVGKTTTATLVCQEAGFSYVELNASDTRSKKTLENVVSESLNNQT
LVDFLGDQKKTTKGPSGQNHCIIMDEVDGVAGNEDRGGIQELIQLIKQTKIPIICICNDR
NHQKMRSLVNYCFDLRFYKPRLEQIKGAMMSIVFKEGLNIPPPALNEIILGANQDVRQVI
HNLSMWCATSKSLTYEQAKEDSTRAKKDLKMGPFDVCRKVFVGGEETSKMTLIDKSDLFF
NDYSIAPLFVHENYIHVTPYSARGSNIRHLSQLAKAADSICNGDLIEKKIRSQSKWGLLP
MEAIFASVIPGEEMRGGISQMIAFPSWLGKNSTQNKNDRILQELHTHMSLHISSDKRGLN
LDYLPFMRKSLTDPLVERENDGVKDVIEMMDSYNIIKEDFDNVMEVSKWPNSSDPFSNLS
SKTKASFTRAYNKESHLTPYSLGGGTKKKKGRGGGADESGLLGEEGEETKAMEEEEEEDN
DLEDGMIKPSFLLITFQMKKSAGGKNAAGGGSTKGKQASESKGKGRGKGKGKSKS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggatattcgtaaattttttgggtcgccacctgtcaagaaggcaagtgggttggaaaaa
gtgaaagaggctaacaacaacaacaacagcattccggcgaagaaagctgataagaactcc
tcagcaaagcacagagatgagaggaaaaatcgggataaaagtgaagaccgcaaaggagac
aaagagagtgaaaatgaagaccgtaaaagagataagaagtcgaggaatgctagtgaggag
tttacaaaggttactgataaagaagagaagatgaatacgagaaagaagagaaaacactct
tctgataaggagtctagtgctaaaaagaagcctattcaggttacccttggtgacagtgac
gatgagtttgatgaagtcattaagaaacgtaaatctaaagctggccgtaggaaaggcatt
gtgtatgattcagactcatcagctgaagaggacccagtgcctaagaaatccaaacggaag
agctctgaatatcagtctgtggtgatagtggactcagacgaggattgtagtagaaagacc
agagcctctcccctaaaggccttcatgaagaaaacccccagtagacctgtagctgaagtg
aagaagaaagtggaagaacaaacaaagcgaactcctgtcagtgctgcagatttctttgga
ggtgggagtgtcaagagagtggacagaaaaccagcgagtaaaagaaaactggaagatgat
tccaaaccctcaaataatgttgacgatgaaattcatgaggatgcagactttgagaaaaca
ttggaacagctagatgagcaaagtcagaagtccaagaagacaaaaacagaatctttgtct
tcacctccaaagaaagagacatctccgtccaaaccttcactgtcgaatagactgtcatct
ttggcgaaatcatcgaaagtaatggtggaagacaccccagagaaaacaaaagcagcacct
gttaaccaaagatcgagtccaaggaagtctgtggtcacacctaaaaagcatgagacacct
aataaatcagaaacaaagaaaacttcaccaggaacaaatgcaggaccagccagtgctaag
acgccatctccagggaaatcccctgttgagaggaaaggcagtgtcngttaccgtaattac
ctgaacagagaaggaccaaagtcgttgggctccaaagaagtaccagagggtgagccaaat
tgtttagaaggactgacttttgttataactggtgttctggaatcgtttgagagagacgaa
ncgaagagtttgttagagaaatatggagcaaaagtcacgcaatctctcagcaaaaagaca
agttatgttgtggtgggaagagacgcaggtgcatccaaacttagtaaggctgaacagttc
aagacaaaacagctggatgaagattctatgttagaactcatcagaactttacctggcaag
aaatcaaagtatgaaattcaagctgaagctgaactgaaaaaggagaaatccaaaactcca
gctccatccacgcctaaagtagaagaaaaactgcaggcattcaagtcctcatcttcaaag
aatttgcagaaaattgaaacacctagcaaatcagcatcagtgaaagaagagaagtcagtg
tcatctgaccaatcagaaccctctttactttgggtagacaagtacaagccgacctctttg
aagaaaatcattggtcaaaccggtgacaaaagcaatgctgtcaagctcattcattggata
aggaactggcacaagaacagggccctcggcaagaaaccttcaggaggattttttgggaag
gatgatggctcagggttccgagcagcgctgttgtcaggacctcctggggtggggaaaacc
accacagccacacttgtatgtcaggaggcagggttttcctatgtggagctgaatgcatca
gatacacgctcaaagaaaacgctggagaatgtggtgtctgaatctcttaacaaccagaca
ctcgtggacttcctgggtgatcagaagaagaccaccaaaggtccatcaggacagaatcac
tgtattattatggatgaagtggacggagtggctggcaacgaggacagaggtggaattcag
gagttgattcagttgatcaagcaaacaaagattcctatcatatgcatctgtaatgatcgt
aaccatcagaaaatgagatcccttgtcaactactgttttgacctgcgcttctacaaacca
agactggaacaaataaagggtgccatgatgtccattgtattcaaggaaggcttgaatatc
ccccctccagcattgaatgagatcatccttggggctaatcaagatgttagacaggttatc
cacaacctgtctatgtggtgtgccaccagtaaatctctgacctatgagcaggcgaaggaa
gactccacgcgtgccaagaaggatctaaaaatgggaccatttgatgtttgtcggaaggtg
tttgtgggcggagaggagacgtcaaagatgaccctaatagacaagtcagatcttttcttc
aacgattacagcatcgcaccattgtttgttcatgagaactacatccatgttacaccatac
tcagccaggggcagcaatatacggcatctgtcacagcttgccaaggcagcagacagcatt
tgtaacggtgacttgattgagaagaaaatacgctctcaatccaagtggggtctgcttccc
atggaggcgatctttgctagtgtgattcctggagaagagatgagaggtggtatctcacag
atgattgccttccccagctggctcgggaaaaattccacgcagaataaaaatgacagaatt
ttacaggagcttcatactcacatgagtctacacatttcttccgacaagagaggcttgaat
ttggattacctcccttttatgaggaaatctctaacagatcccctggtggagagagaaaat
gatggtgtgaaggatgtgatagaaatgatggacagctacaacatcatcaaggaagacttt
gacaatgtcatggaggtctctaagtggccgaatagttctgatccattctcaaacctaagt
tcaaaaaccaaagcatctttcacgcgggcttacaacaaggaaagtcatctcacgccatac
tcacttggaggcgggacgaagaaaaaaaaaggaagagggggtggggctgatgagtctggg
ttgctaggcgaagagggtgaggaaaccaaggcgatggaagaagaggaagaggaggataat
gaccttgaagatgggatgatcaagccctcgtttctgctgataacttttcagatgaaaaaa
tctgcaggtggtaagaatgcagcaggagggggaagcacaaagggaaaacaggccagcgag
tcaaagggcaaaggtcggggcaagggcaaagggaagagcaaaagctga
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integrated database retrieval system
