Liolophura japonica (common chiton): 135463551
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Entry
135463551 CDS
T09976
Name
(RefSeq) DNA mismatch repair protein Msh6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
135463551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ljp03400
]
135463551
DNA repair and recombination proteins [BR:
ljp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
135463551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
nSTAND_NTPase5
PilJ
Motif
Other DBs
NCBI-GeneID:
135463551
NCBI-ProteinID:
XP_064596885
LinkDB
All DBs
Position
3:complement(6268020..6308829)
Genome browser
AA seq
1355 aa
AA seq
DB search
MSKVNTLFSYFNKSPVAQKKKDATPKPDVLTPKRSPNSAKNGKKSPPKKVSKIENVIDNK
VHHQLDGVSLFDVVWAKLEGYPWWPSLVCNHPTQGTCKKGGKSPQVHVQFFDDPPSRAWV
KSKFVKPFAGSDDKQCKQGGQFFTWDKKCQKAATEADKAQSMSVADRENLVVVLDPSDDE
DGEGMEMTMSDEELLAAADNSKENSMNLSVISAGGPESAEKNRRRTRQRNGKPAKRRRIV
VAADSDESGDEFKPPSDDDSESDSGSSGVDENEVSSPESASEVDSPVKVNSRKRKRSAGT
KSEKKSSQESLESFSASSTPRRNTNCSPSFTPTVGAKTKSKLASFSAPEMSSSPEGETTT
VFKHLQLEFLKPDKIRDKDRRLRTDPEYDPRTLYIPDSFLKDTTPAMRQWWEIKRAHFDT
VLFFKMGKFYELFHMDAAIAVNELGLIYMKGDYAHSGFPEIAYGRYADTLIQKGYKVARI
EQTETPEMMAERCKTSVKTTKFDKVVKREICRITSKGTKTFSFIDGDTSEAQNNYLLAVA
EKEASQNGLSLFGVCFVDTSIGTVHIGQFSDDRYSSRLRTLIAHYTPVQILFERGKMTSR
THQVLNSNLTSVIKEGLTSGTEFWDSSKTLKKLAEADYFTEEGHTGVKWPGVVQEMISET
DSLGLSPADGCDLALKALGAITWYLQYSLMDDEVLSMKKFEKYIPVDAAEKVEDSVADFT
KGRQHMVIDGVTLTNLDIVDLGSERGQEGTLSQQLDRCSTPFGKRLFRQWLCAPLCNPKS
INDRLDAVEDLIGRQEVVVEATEILKKLPDLERLLSKIHSLGLPMKGKNHPESRAILYEE
VTYSKRKIEDFLCTLSGFKAVLSMVKLFKAHTDKFKSKLLRKTVTIAKGENPEACFPDIQ
EELAAFDEAFDHNKAKKDGVIIPTSGVDEEYDSAKSKIKATEKELDAYLSQQRQRLGCQS
VTYWGSAKNRYQMEIPENVAKKVPDEYELTSSKKGWKRYRTKWIEELLAELSDAEDKKDA
ALKDVMRRIFHKFDQGYTIWERAVQCVAVLDVLISLANYSHCGDGPLCRPEVVSPGKGTK
PFLEIREARHPCVTRTFGGGDFIPNDTVIGIADENEMDTDAGDGESSVVLVTGPNMGGKS
TLMRQVGLITVIAQMGCYVPAEKCLLTPVDRIFTRLGASDRIMSGESTFFVELSETSAIL
QHASPHSLVLVDELGRGTATYDGTAIACAVVHELSLKTQCRTLFSTHYHSLVEEFSHDPN
IRLGHMACMVENENDEDPSQETITFLYKFVKGACPKSYGFNAARLANLPEEIIQVSQRKA
KEFEQSVDNLRLLRSVWKTREKSQLSSLQSQIRVS
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagtgaacactttattctcgtactttaacaaaagccctgttgcacagaagaag
aaagatgccaccccaaagccggacgtgttgacaccgaaacgatcgccgaattcagcgaaa
aatgggaagaaaagtccgccaaagaaagtctccaaaattgagaatgtgatagacaacaaa
gttcatcatcaacttgatggtgtatctctgtttgatgttgtatgggccaaacttgagggt
tacccctggtggccaagcctagtttgtaatcacccgacccaggggacctgtaaaaaaggg
ggcaaatctcctcaggttcatgtccagttcttcgatgacccgccatcccgcgcctgggtc
aaaagcaaattcgtgaaaccctttgctgggagtgatgataaacaatgcaaacaaggtggt
caatttttcacatgggataagaaatgccaaaaggctgctacagaagcagacaaagcccag
tcaatgtctgtcgctgatcgtgagaacttggtggtggtcctggacccgtcggatgatgag
gatggggaagggatggagatgacaatgtctgatgaagagttgctggcagcggccgacaat
agtaaagaaaacagcatgaacttgtctgtcatttcggcaggtggaccagagtctgctgaa
aaaaaccgaagacgaacaagacagaggaatggaaagccagccaaacgacgccgaattgtt
gtagcagcagacagtgacgaatcaggcgatgaattcaaacccccctctgatgatgatagt
gaaagtgatagtggaagcagtggggtggatgaaaatgaagtctcgtcacctgaatcagca
tcggaagtggactctccagtcaaggtaaattcgagaaagaggaaacgatcagcaggcaca
aaatctgagaaaaagtcctcccaggaaagtcttgagtcgttttctgcctcgtcaactcct
cgccgaaacaccaactgctccccatcatttaccccaacagtcggagctaaaacaaagtcc
aaattggcctctttctcggcaccagaaatgagttcaagccctgaaggggagacaacaact
gttttcaagcatcttcagctggagttcctgaagccagacaagatcagggacaaggacaga
agattgcggacagaccctgaatatgatcccagaactctctacattccggattccttcctg
aaagacacaacacctgccatgcgtcagtggtgggaaatcaaacgagctcattttgacaca
gttttattttttaagatgggaaaattttatgagttgttccacatggatgcggctatcgct
gtcaatgaattaggtctgatctacatgaagggagactatgctcactctggcttcccggag
atcgcttatggtcgctatgctgacacgctcatacagaaaggctacaaggttgccagaata
gaacaaacagaaacgcccgaaatgatggcggaaaggtgtaaaactagtgtaaaaactacc
aaatttgacaaagttgtgaagcgtgaaatctgtaggatcacatccaaggggacaaagact
ttcagctttatcgacggagatacaagtgaggctcagaacaactacctgctggcggtggct
gaaaaggaggcatcccagaatggcctgagcttatttggggtttgttttgtggatacgtcc
atcggcaccgtacatattggtcagttctcagatgacaggtactcgtcacgtctgcgtacc
ttgattgcacattacacacctgtgcagattctgtttgagcgtgggaaaatgactagtcgg
actcatcaggtgctgaactccaatctgacctccgttataaaggaaggtttgacatctggc
acagaattttgggatagcagcaagaccctgaagaaactggcagaggcggactactttact
gaggaaggacacacaggtgtgaaatggccaggtgtcgttcaggagatgatctcagaaact
gactctctgggattgtcgccagcggacgggtgtgacttggctctcaaagcactgggggcc
atcacttggtatttgcagtattcattgatggatgatgaagtgctgtctatgaagaagttt
gagaagtacatccccgtggatgctgcagaaaaggtggaggactctgtagctgatttcacc
aaaggcagacagcacatggtcatagatggagtgaccttgacaaaccttgacatcgttgac
ctggggtcagaaagaggtcaagagggcacgctgagtcaacagttggatcgctgctctact
cctttcgggaagaggctgttccgtcagtggttgtgtgctcctctgtgtaaccccaaatcc
atcaatgatcgactggacgctgtggaagatttgattggtcggcaagaagtggttgttgag
gcaacggaaatacttaaaaaattaccagacttggagaggcttttgagcaaaattcatagc
ttgggtttaccaatgaagggaaagaatcacccggagagtagagccattctctatgaggag
gtcacatacagtaaaagaaagattgaagattttctgtgcacattgagtgggtttaaagcc
gtcctcagtatggtgaaactcttcaaggctcacacagacaagtttaagtcgaagctgtta
agaaagactgtcacgatagcgaagggagagaaccctgaagcttgtttcccagacatacag
gaggagttagctgcctttgatgaagcgtttgatcacaacaaagcaaagaaagatggtgtc
atcattccaacctcaggtgttgatgaggagtatgacagtgccaagagcaaaatcaaagca
actgagaaagaactggatgcttacctctcacaacaacgacaacgtctaggctgccagtca
gttacttactggggaagtgctaagaatcgatatcagatggaaatccccgaaaatgtggcc
aagaaagttccggacgaatatgaactgacgtcatcgaagaaaggctggaagagatatcgc
acaaagtggattgaagagctgttagcggagctctctgatgctgaagataagaaagatgcg
gccttgaaagatgtcatgaggagaatatttcataaatttgatcaaggctacacaatatgg
gagagagctgttcagtgcgtggctgtcctggatgttctcatctcattggccaattatagc
cactgtggtgacggaccactctgccgacctgaggttgtctcccctggtaaaggtaccaag
ccatttttagaaataagagaggctcgccatccttgtgtgacccgaacgtttggaggaggg
gacttcatccctaacgacactgttatcggcattgccgatgagaatgagatggataccgat
gctggggatggagagagcagtgttgtcttggttacgggtcctaacatgggcggtaaatca
acactgatgagacaagtaggactgataactgtgatcgctcagatgggctgttacgtacct
gctgagaagtgccttcttacacctgtggacagaatcttcacccggctgggggccagcgac
aggatcatgtcaggtgaaagtacattttttgtggagttgagtgagacgtcagccattttg
cagcatgcctctcctcactccctggtcctggtggatgaattggggcgaggaacagctacc
tatgatggtacagctatcgcttgcgccgtcgttcatgagctgtccttaaagacgcaatgt
cggactttgttttccacgcactatcactcattggtggaggagttctcacatgacccgaat
attcgcctcggtcacatggcctgcatggtggaaaatgaaaatgacgaagacccaagccaa
gaaaccatcacgttcctgtacaagtttgttaagggggcatgtccaaagagctatgggttt
aatgctgctcgattggctaatttaccagaagagatcatccaggtgtcgcagagaaaagct
aaggagtttgaacaaagtgtggataacctgaggctgctaagatcggtgtggaagacgaga
gagaagagccagctttcaagcctgcagtctcaaattagggtgtcgtga
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