Liolophura japonica (common chiton): 135463640
Help
Entry
135463640 CDS
T09976
Name
(RefSeq) squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp00100
Steroid biosynthesis
ljp01100
Metabolic pathways
Module
ljp_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
135463640
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ljp01006
]
135463640
Enzymes [BR:
ljp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
135463640
Prenyltransferases [BR:
ljp01006
]
Terpene biosynthesis
Squalene/phytoene synthase
135463640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
UvsW_N
Motif
Other DBs
NCBI-GeneID:
135463640
NCBI-ProteinID:
XP_064597074
LinkDB
All DBs
Position
3:complement(13536687..13550603)
Genome browser
AA seq
417 aa
AA seq
DB search
MDLLKSFAHPDEVVALLKFKLGGYSKTMPKNDYDKMSKTLQKCYDYLNKTSRSFAAVIQA
LEGDLRHAVCIFYLVLRALDTVEDDMTIPVKVKVPMLMNFHKNLYDRSWNFTESKEKDRM
VLEDFPTITHEFLELARHYQVVIEDITKRMGKGMTVFLDKGVGSMEEWNEYCHYVAGLVG
IGLSQLFSASGLEGSIVGQDQRLANNMGLFLQKTNIIRDYLEDSVEGREFWPKAAWGKYA
SKLSDLAKPEKRVDAVLCLNELITNTLELVPDLMTYMSRLKNQSIFNFCAIPQVMAIATL
ERCYDNPGVFTGVVKIRKGEAVRMMMEATSLDSVKAIFAYFLNQINKRIPGSGRATEKTR
SVCTQALQMTQTSHSYTTVSIYPPLYVSCAMLVSAILWKYWASVATLYSYSNDNSDN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggatcttctaaagtctttcgcccaccctgacgaagttgtggctttgctcaaatttaaa
cttggcggatattcgaaaactatgccgaagaatgactatgacaagatgtcgaagacttta
caaaagtgctatgattacttaaataaaacaagtcggagttttgctgctgtaattcaagct
ctggaaggcgacctcaggcatgctgtgtgtatattttacctggtactgagggctctggat
acagtagaagatgacatgacgatacccgtgaaagtgaaagtgcccatgcttatgaacttt
cacaaaaatctctacgacagaagctggaatttcactgagagcaaagagaaagatcgaatg
gttctggaagatttccctaccattacacacgagttccttgagttagccagacactatcag
gtggtcattgaagacatcaccaagaggatgggcaaagggatgactgtgttcttggacaag
ggagtcggatccatggaggaatggaatgagtactgtcactatgtggcgggtctggtgggt
attggcctgtcacagctgttctcagcctcagggcttgaaggtagcattgtgggacaggat
cagaggctagcaaacaacatggggctgttcctacagaaaacaaacatcatcagggactat
ctagaggactctgtggaagggagagaattctggcccaaagctgcatggggaaagtatgcc
agtaagctgtcggatctggccaagccggaaaagcgtgttgatgcagtattgtgtcttaac
gagcttattacaaatacgttggaactggtgcccgatctcatgacatacatgtctcgcctg
aaaaaccagtccatcttcaacttctgtgccattcctcaggttatggcaatagccaccttg
gagcgttgctatgacaacccaggtgtgtttacaggtgtggtgaagattcgtaaaggtgaa
gccgtccgtatgatgatggaggcgacttccctggacagcgtaaaagcgatctttgcttac
tttctgaaccagataaacaagagaataccaggtagtggtcgtgcgaccgaaaagacgcga
tcagtgtgcacccaggccctccagatgacgcagacgtcgcattcgtacaccactgtcagt
atttacccccctttgtacgtgtcctgcgctatgctggtctctgcaatactctggaagtac
tgggccagcgtggcaactctttactcttactcaaatgataactctgacaactga
DBGET
integrated database retrieval system