Liolophura japonica (common chiton): 135463657
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Entry
135463657 CDS
T09976
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ljp01009
]
135463657
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljp03019
]
135463657
Protein phosphatases and associated proteins [BR:
ljp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135463657
Messenger RNA biogenesis [BR:
ljp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
135463657
mRNA cycle factors
Stress granule specific factors
135463657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
DND1_DSRM
Dicer_dimer
Motif
Other DBs
NCBI-GeneID:
135463657
NCBI-ProteinID:
XP_064597091
LinkDB
All DBs
Position
3:complement(16346939..16364740)
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AA seq
764 aa
AA seq
DB search
MMSQVSKNSAGASSETTEAGPGLLYSRSVVTPPGKSGMEKSEVTGTATTMTSVTSSSMSP
VPGVLNLHPNLLSSFQQAKMTAPALPANKLKVTGNAGTNQNGAVSKTLGNSGLEAGGFIN
GGGSLAGVSVAGGSATEGAVTAKAKSSPSEMSALQQQFEHLQMINDSLANTKEKTPMCLI
NELARFNKVQHQYTLIDEQGPAHKKTFYVKLKLGEEEYSAQGPSIKKAQHAAASSALAAT
ALEHPPPKPPRATLVGGNGVNNITPTVELNALAMKRGEAAVYKPIEPRHPSYYPPPNFDF
RGMYNQRYHYPRMPRMFYTSLKVGPREFIGEGPTRQAARHMAATKALKILRLIPLPNQSA
GKIKDEPDITKTEILDEKDNLKSEISLVHEIALKRNLEVVFQVTRESGPPHMKVFVTQCR
VGDYTTEAQGNSKKLSKKKAAEKMLEQLRQLPSVTSTSQKAKPKMMTTKKKNRNLIKVET
LSTAQKADPGYGVGINPISRLIQIMQAQKKKEPVYTLITERGQPRRREFVMQVCVEDKTC
TGVGPNKKLAKRNAAEEMLQLLGFSRPSPQPSKPALKSGISDFASGDKKVTFSDPEDGIA
TNGKGVRQLMPGLLFLPEKSRQPNVGRRNLGSLAGGDNLQVTNFLNMNTGLRAEQQLVAI
AKANNFTVEFDDFSGKECLCRVTMSTTPTHSVHGTGPTRQAARDTASFAALKHLVESGTV
DLKAIAAGEDKVVSGDGPVKSTNDVGITMKGGLVGDSLRTTATL
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcacaggtatccaagaatagtgcaggggcaagctcagagacgacggaggcagga
cctggcctcctctactctcgctcagttgtcacccctcccgggaagagtggcatggagaag
agtgaggtcacgggaacggcgactacgatgacttcggtcacatcaagctcgatgtccccg
gtaccaggagtgctcaacctgcaccctaacctcctgtcgtcttttcagcaggcaaaaatg
actgctcccgcattgccagccaataagctcaaggtgactggcaatgccggaaccaatcaa
aatggagcagtgtctaagacgctggggaactctgggctggaagctggaggattcataaat
ggagggggctccttggctggagtatccgttgctggaggatccgccactgaaggagccgta
acggccaaagctaagagttctccgtcagagatgtccgccctgcagcaacagtttgagcac
ctacagatgattaacgactccttggcaaacacaaaagagaaaacaccgatgtgtctgatc
aatgaactggctcgcttcaacaaggtccagcatcagtacaccttgattgatgaacaaggg
ccagctcacaagaagacattttacgtcaaactaaaactgggggaggaggagtactcagcc
cagggcccaagcattaagaaggctcaacacgctgctgcatcttctgctctagcagctacg
gcactcgagcaccccccgccaaagcctcctagagctaccctggttggtggaaatggtgtg
aacaacatcacccctactgtggagctgaatgctttagccatgaagcggggggaggcagct
gtctacaaacccatagaacctcgccacccctcgtactacccaccccccaactttgacttc
aggggcatgtacaaccagaggtatcattacccccgaatgcctaggatgttctacacctcg
ctgaaggtgggtccgcgggagtttatcggggaggggcccacacgccaagctgctcgtcac
atggctgccacaaaagccctcaagatcttgcggttaatccctctccccaaccagagcgcg
ggaaagatcaaagacgagcctgacatcacaaagactgagattctggatgagaaggataac
ttgaaatccgagatcagcctggtccacgaaatcgcccttaagagaaaccttgaggttgtc
ttccaggtgacccgggagtcaggccctccccacatgaaagtctttgtgacacagtgtcgt
gtgggagactacaccactgaggcgcaaggcaacagtaaaaaactctccaagaaaaaagct
gcggagaaaatgcttgagcagttacgtcagctgccttctgtcacctcaactagtcaaaaa
gccaaaccaaaaatgatgacaaccaaaaagaaaaacagaaacttgatcaaggtagagacg
cttagtaccgctcagaaagccgacccaggctacggggtagggatcaaccctattagtcgc
ctcattcagattatgcaggctcagaagaagaaggaaccagtctatacgctgatcacagag
aggggacagcccaggcggcgagagtttgttatgcaggtgtgcgttgaagacaagacatgc
acaggtgtgggacccaacaagaagttagccaagcgtaatgcggctgaagagatgttacag
ctgctgggcttcagccgaccctcaccccagccctctaaaccagctctcaagtcgggcatt
tctgattttgcatctggagacaaaaaagtaacgttcagtgatccagaagatggtattgct
accaatgggaaaggtgttcggcagctcatgcctgggcttctcttcttacctgagaagagt
cgccagcccaatgtgggcagacgcaacctgggctcactagcagggggagacaacctccag
gtgacaaactttctcaatatgaacactggattgagagccgaacaacaactggttgccata
gcgaaagctaataattttactgtggaatttgacgacttttctggcaaggaatgcctgtgc
cgcgtgacaatgtccacaacacccactcactcagttcatggcactggtcccactcgtcag
gctgccagagacactgcctccttcgcagcactcaaacatctggtcgagagtggcactgtt
gacttgaaggcaatcgccgcaggggaagacaaagttgtcagtggggatgggccagtcaag
tctaccaatgacgttgggatcaccatgaaaggtggacttgttggagattccctgcgaaca
acggctactctctaa
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