Liolophura japonica (common chiton): 135463722
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Entry
135463722 CDS
T09976
Name
(RefSeq) DDB1- and CUL4-associated factor 13-like
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ljp03009
]
135463722
04121 Ubiquitin system [BR:
ljp04121
]
135463722
Ribosome biogenesis [BR:
ljp03009
]
Eukaryotic type
90S particles
Other 90S particles
135463722
Ubiquitin system [BR:
ljp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
135463722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_IFT140_1st
eIF2A
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
WD_LRWD1
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
135463722
NCBI-ProteinID:
XP_064597203
LinkDB
All DBs
Position
3:complement(23197168..23210446)
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AA seq
448 aa
AA seq
DB search
MAAKFRVKLLSRNPDDYLRETKRDIHKVPRNYDPALHPFEAPREYMRALNATKLERVFAK
PFLGSLDGHKDGVHSLLKHPSSLSLLLSGACDGEVRVWNLAQRTCVSTVQAHQGFVNGMC
YHPSNNYFFTCGADKTIKQWSMSLEGEVEAEPINTVLGKTTFYSMDHHWQESVFATCGDQ
VDIWDEERAEPVRSFAWGVDSVNTVKFNPIETHLLGATASDRSILLYDMRGSTPLRKVIL
KLKSNAIVWNPMEAFVFTVANEDYNLYTFDVRNLKIPANIHMDHVSAVTDVDFSPTGKEL
VSASYDKTLRIFPIEKGRSREVYQTKRMQRVQVVKWSLDNKYILSGSAEMNIRVWKAKAS
DKLGVLRPREKSAFNYNEKLKEKFQHHPKFRRIARHRHVPKLIYNAKKELQTIRQSQKRK
EANRRAHSKPGAVPFVSEREKSVVGEEQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaagtttagagtcaaactgctgtctcgaaacccagacgattacctgcgtgaa
accaagcgagatattcataaagttccaaggaactatgaccctgctcttcaccctttcgag
gctccccgagagtacatgagagccctgaatgccacaaaactggaacgtgtgttcgctaag
ccgtttctgggttctcttgacggtcataaagacggcgttcactctctgttgaaacacccg
agtagtctgtcccttctgttgtcaggtgcctgtgatggagaggttagggtttggaacctg
gcgcagaggacctgtgtgtccacggtgcaggcgcaccaaggcttcgtcaacggcatgtgt
taccatcccagcaacaactacttcttcacatgtggtgcagacaagaccataaaacagtgg
agcatgtcattggagggtgaggtggaggctgagccaatcaacactgtcctaggaaagact
actttctactccatggaccatcactggcaggagtctgtgttcgctacgtgtggcgatcag
gtggatatctgggatgaggagcgagcagagcctgtgcgtagttttgcctggggagtggac
agtgtcaacaccgttaagtttaaccctatagagacacacctgttgggagcaacagcctct
gaccgcagtattctgctttatgacatgagaggctcaactccattacggaaggtgatctta
aagttgaagtcaaacgctatcgtctggaacccaatggaagcatttgtgttcactgtggcc
aatgaagactataatttgtacacctttgacgtgaggaatctcaagatcccagcaaacatt
cacatggaccatgtgtcagcagtgacagatgttgatttctctccaactggaaaagagctg
gtttcagctagttacgacaaaacactccgcatttttccaattgaaaaaggccgaagccgg
gaggtttatcaaactaagaggatgcagagagtgcaggtggtcaagtggtctctagacaac
aaatatattctgtctggctcagcagagatgaacatcagggtgtggaaagctaaggcctcg
gacaaacttggcgtgcttcgaccacgagagaaatccgctttcaactacaatgagaaacta
aaggaaaagttccagcatcacccgaagttccgacgaatagcacgacacagacacgtgccg
aagttgatctacaacgcaaagaaagagcttcagaccatacggcagtctcagaagagaaag
gaggccaacagaagggctcacagtaagccgggtgcggtgccatttgtgtcagagagagag
aagtctgtggttggggaggagcagtga
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