Liolophura japonica (common chiton): 135463751
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Entry
135463751 CDS
T09976
Name
(RefSeq) pre-mRNA-processing factor 6-like
KO
K12855
pre-mRNA-processing factor 6
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135463751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ljp03041
]
135463751
Spliceosome [BR:
ljp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
135463751
Complex C
U5 SnRNP specific factors
135463751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
TPR_17
HAT_PRP39_C
TPR_16
Suf
HAT_Syf1_CNRKL1_N
TPR_2
HAT_Syf1_CNRKL1_C
TPR_8
ARM_TT21_2nd
TPR_1
TPR_21
TPR_9
TPR_11
NatA_aux_su
ARM_TT21
ChAPs
DUF4404
CCDC113_CCDC96_CC
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
135463751
NCBI-ProteinID:
XP_064597243
LinkDB
All DBs
Position
3:20295869..20317139
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AA seq
930 aa
AA seq
DB search
MSAQSLINKKKKSFLGLPAPLGYVPGLGRGATGFTTRSDIGPARDADDISDDRHAPPIKK
KRDNDDDDEEDLNDANYDEFAGYGGSLCNKDPYEKDDEEADAIYEAIDKRMDEKRKERRE
KRLKEEIEKFRQERPKIQQQFSDLKRDLAEVSYDDWMNVPEVGDVRNKHQRNPKKEKYTP
VPDSLLARAAAQTGTSTSLDAREQFGGLTTPYGGALTPGFATPGGDIDMQKIGEARNTLM
GIKLEQVSDSVSGQTVVDPKGYLTDLQSMLPSHGGDINDVKKARLLLKSVRETNPKHPPA
WIASARLEEVTGKLQAARNLIMKGCEECPKSEDVWLEAARLMPGDQGKAVIAQAVRHIPQ
SVRVWIKAADIETELKAKKRVFRKALEQLPNSVRLWKAAVELENEEDARIMLSRAVECCP
TSCELWLALARLETYENARKVLNKARENIPTDRQIWITAAKLEEANGNMHMVEKIVERAL
SSLRANMVEINRDQWIKDAEDCEKSGSIFTCQAIIRAVIGIGVEEEDRKHTWMNDAEACA
QHDAYECARAIYAHALTMFASKKSIWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLW
LMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAIKLESENNEFDRARRLLQKARNS
APTARVMMKSVKLEWCLREIENAKILLDEAVKHYPDFPKLWMMKGQIEEQEGHMAEAREA
YNQGLKKCPTSIWLWLLLSRLEENSGQLTKARSILEKARLKNTHAPELWLEAVRVENRAG
LKNIAQTLMAKAMQDCPNAGILWAEAIFMEPRPQRKTKSVDALKKCEHDPHVLLAVSKLF
WTERKLVKAREWFQRSVKIDPDLGDSWAYYYKFEMMHGTEEQQEAIRRLCANAEPHHGEN
WCRISKDIANWRLRTEELLPLVADSLPVPV
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcacagtcattgatcaacaagaaaaagaaaagttttctagggttaccggcgcct
ttaggatatgtccccggtctaggaagaggtgccaccggtttcacaacacgatctgatatt
ggaccagccagagatgctgatgacatatctgatgaccgccatgctccacccattaagaaa
aaacgagacaatgacgatgatgacgaagaggatttgaatgatgctaattatgatgagttt
gctggctatggaggaagtttgtgtaacaaagatccttatgagaaagacgacgaagaagca
gatgcaatttatgaggcaatagataaacgcatggatgagaagcgaaaagagagaagagag
aaaaggctgaaagaagaaatcgaaaaatttcgtcaggaaagaccaaaaatccagcaacag
ttttcagatttgaagagagatctggcagaggtgagctacgatgattggatgaacgtacct
gaggtaggagatgtcaggaacaaacatcagaggaatccaaagaaagagaagtacacccca
gttcccgacagtctattggctagagcagcagcccagacaggtacttccacctcattggat
gccagagaacagtttgggggcctgacgaccccgtatggtggagccctgaccccagggttt
gccacgccgggcggtgatatcgacatgcagaagattggagaggccaggaacaccctgatg
gggatcaagttagaacaggtgtcggactctgtgagtggccagactgttgttgaccctaaa
ggttacctgacagatctccaatcaatgctgccctctcatggaggagacattaatgatgtg
aagaaagctcggctgctgttgaagtccgtgagagaaaccaaccctaaacatccgccagcc
tggatcgcgtctgctcgtctggaggaggtcaccgggaaactgcaggcagccaggaacctg
atcatgaaaggctgtgaggaatgtcccaagagtgaggatgtctggctggaggctgccagg
cttatgccaggagaccagggcaaagctgtgatagctcaggcagtgcgtcacatcccacag
tcagtcagggtctggataaaggcagccgacattgagacagaactcaaggctaagaaaaga
gtcttcaggaaagccctggagcagttgccaaactctgtacgtttgtggaaggctgcagta
gaactggagaatgaagaagatgctcgtatcatgttgagtcgagcagtcgagtgctgtccc
acgagctgtgagttgtggttggctctggcaagactggagacgtatgaaaatgcacgaaaa
gttctgaacaaagctcgagaaaacatcccgactgatcgtcagatttggatcacggcagct
aagctggaagaagccaacgggaacatgcacatggtggagaagattgtcgagagggccctt
agctccctgcgggccaacatggtggaaatcaacagagaccagtggatcaaagacgcagag
gactgtgaaaagtccggcagcattttcacctgccaagcaatcatccgggctgtgattggt
attggagtggaggaggaagacagaaaacacacctggatgaatgatgcggaggcgtgtgcc
cagcatgatgcctacgagtgtgcccgggctatctatgctcacgcactcaccatgtttgcc
agcaagaagagtatctggctaagggcagcttactttgagaagaaccacggcaccagagag
tccctggaggctttgttacagagagccgtggctcactgtcctaaggcagaggtgctctgg
ctgatgggggcaaagtccaagtggctggcaggtgatgtcccagcagcaagaagtatcctc
gccttggccttccaggctaaccctaacagcgaagaaatctggttggctgctattaaactg
gagagtgagaataacgagtttgacagagcgcgacgccttctgcagaaagctcgcaacagc
gcccctacagcgcgggtgatgatgaagtcagtgaagctggaatggtgtctgagggagatt
gagaatgctaagattttactagacgaggctgtcaaacattacccggatttccccaagttg
tggatgatgaagggtcagattgaggagcaggaaggtcacatggctgaagcaagagaagca
tataaccaggggctgaagaagtgtccaacgtcaatctggctgtggttgttgttgtcacga
ctagaagagaattccgggcagttgaccaaagccagatccatcctggagaaagctcgactt
aagaatactcatgcccctgagctttggcttgaagcggttagagtggagaacagagcaggc
ctaaagaatattgcacagactctgatggcaaaagcaatgcaagactgcccaaatgctggt
atactgtgggcagaagccatcttcatggagccgcgtcctcagaggaagaccaaatccgtg
gatgctctgaagaaatgtgaacacgatccccatgtgctgctggctgtctcaaaactgttc
tggacagagcgtaaactggtgaaggctcgggaatggtttcagaggtcagtgaagattgac
ccggacttgggagactcctgggcatattactacaagtttgaaatgatgcatggaacagag
gagcagcaagaggccatacgccgcctgtgtgctaatgcagagcctcaccatggggagaat
tggtgccgaatttccaaagacattgctaactggcggcttcggacagaggagttattgccc
ttggtggcagattctttgccagttccggtgtag
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