Liolophura japonica (common chiton): 135464047
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Entry
135464047 CDS
T09976
Name
(RefSeq) exosome complex component MTR3-like
KO
K12587
exosome complex component MTR3
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135464047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljp03019
]
135464047
Messenger RNA biogenesis [BR:
ljp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
135464047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PigL_N
Motif
Other DBs
NCBI-GeneID:
135464047
NCBI-ProteinID:
XP_064597592
LinkDB
All DBs
Position
3:2746543..2760842
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AA seq
277 aa
AA seq
DB search
MPGDSRRIAGPEETQNPYSFVKDKGDGEQFLLLNKEKLRADGRATDKVRPVFLKAGVISQ
AKGSAYIELDKTKAICAVYGPREVIKKEDFSMKGQLTCDFKFATFSCRYRRQHQQDNEEK
DLSVLLLEALEPAVCLHKFPKAQLNIYLTVLENDGSVLPAAIMCASVAIADAGIEMYDLV
TACSARISGKNILLDPSDAEEYRSQHTATEGLESGSLTLGILPSLNQVSALSSKGEIQFE
TIEKAIKQCTDCCHKLYPVMQECLVKAVKAKMSEKGT
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcctggagattcgcgacgaatcgcgggaccagaagaaacacagaatccatactctttt
gtgaaagacaaaggggatggagaacaattccttttgttgaacaaggaaaagctacgggct
gatggaagggctacagataaggttcgaccagtgtttttaaaagctggtgtgatcagtcag
gctaaggggtcggcatacatagagctggacaagacaaaggcaatatgtgctgtgtacggc
cccagagaagtaatcaagaaggaggactttagtatgaaagggcagcttacctgtgacttc
aaatttgccacattctcctgcaggtatcgccgccagcatcagcaggacaatgaagagaaa
gacttgtctgtcctgttactggaagccttggaaccagctgtgtgtctgcacaaatttcct
aaggctcagctgaacatttacctgacagttctggaaaacgatggaagcgtgttacccgct
gccatcatgtgtgcatctgtggctatagcagatgcaggtatagagatgtacgatttggtg
acggcttgctcagcgagaatttctgggaaaaatattttactggatccatcagatgcagaa
gaatatagatctcaacacacagccacagaaggattggagtctgggagtctcaccctcggt
attctgccatctctgaaccaagtctcggctttgtcctccaagggagaaatacagtttgaa
actatagaaaaggctattaaacagtgcactgactgctgtcataaactgtacccagtgatg
caggaatgtttggtgaaagcagtcaaagcaaagatgtctgaaaaaggaacatga
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