Liolophura japonica (common chiton): 135464062
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Entry
135464062 CDS
T09976
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135464062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ljp03021
]
135464062
03036 Chromosome and associated proteins [BR:
ljp03036
]
135464062
Transcription machinery [BR:
ljp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
135464062
Coactivators
SAGA/TFTC/STAGA complex
135464062
Chromosome and associated proteins [BR:
ljp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
135464062
STAGA complex
135464062
TFTC complex
135464062
SAGA complex
135464062
SLIK complex
135464062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
TFIID_NTD2
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
ANAPC4_WD40
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_Nup120_160
Beta-prop_SPT8
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR19_1st
WDR54
Beta-prop_NWD2_C
WD_LRWD1
Beta-prop_IP5PC_F
PEP5_VPS11_N
PROPPIN
Beta-prop_WDR35_TULP_N
Mala_s_1-like
Motif
Other DBs
NCBI-GeneID:
135464062
NCBI-ProteinID:
XP_064597611
LinkDB
All DBs
Position
3:21733865..21748475
Genome browser
AA seq
591 aa
AA seq
DB search
MKRTRHEHIHATLNQYLKRRAYTDGEVSQKRECKHCKSLELLAVDNLVKAESGMDDILSY
SSISGDATAYDQQFHRLKHFIKDAVEPHRTELKEVLYPMFVHVYLELLCNGHKMPAHKFY
ARHSGLAADEEERRPFMEALIKLGGQSDIAQHREASEFRDHKYNLCLTGDSLQYLMRHLK
VDDNMIMLQIFNQHFKVILHTDNKPNLELLTDQNGNKSHSSSLSPSPPKKHTRDEVSLNL
LQECIKRVRDGPPCLPSICFYTFLNAYQGLICSVISPDNTVISGGFEDSSIKLWSLAPKK
LSTAPSTCNPSHVLLGSQYEDESEDEITRVTMREQETVCLRGHCGSVFKTCFSHDTKYLL
SCSEDTTVRLWDLNTHTNVVCYRGHAYPVWDIDVSPVGGNFVSCSHDHTAKLWSTDRLFP
LRSYIGHSYDVDCIQFHPNSNYVATGSSDKTVRLWSAQEGKSVRLLQGHRSGVLSVAFSP
NGKYLASAGEDRRIRVWDLGSGQLYKEFKGHTDTVYALSFNRDGSLLASGGLDCCIRIWD
TRKGSNTCHGNTALTDGHTSSELLGAFPTKSATVNFLRYADCNLLQAAGPI
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaactcgacatgagcacatacatgcgacattgaatcaatatttaaagagaaga
gcctacacggatggtgaagtgtcccagaagagggaatgtaaacactgtaagtctctggaa
ctgctggcagtggacaacctggtgaaggcagaatctggcatggatgatatcctgagttac
agcagtatatccggagacgctacagcatacgatcagcagtttcacaggttaaagcatttt
ataaaggatgctgtggagccccataggacagagttgaaggaggttctgtacccaatgttt
gtgcatgtttacctggaacttctgtgtaatggacacaagatgccagctcacaagttttac
gcccgccacagtggccttgcagcagacgaggaggaaaggcggccgttcatggaagcgctg
atcaagctgggagggcagtctgacatcgcgcagcatcgagaggcatcagagttcagggat
cacaaatacaacctctgtctgactggagacagcttacagtatctcatgaggcatctgaag
gttgatgataacatgataatgttacagattttcaatcaacacttcaaagtcatacttcac
acagacaacaaaccgaatctggagcttctgactgatcaaaacgggaacaaatcacactcc
tcatcattgtcaccgtcaccacccaagaaacacacgagggatgaagtgtccctgaacttg
ctacaagagtgtatcaaacgggtcagagacggacccccttgtctgccctctatctgcttc
tataccttcctcaatgcttaccaaggacttatctgtagtgtcatatctcctgacaacacc
gtgatatcagggggatttgaagactccagtattaaactgtggagcctcgctccaaagaag
ttgtcgacagcgccttctacctgcaatcccagtcatgtgttgttggggtcacagtacgaa
gacgagagcgaagatgaaataacgagagtgacgatgcgagagcaggaaacagtgtgtttg
cgaggtcattgcgggtcggtgttcaaaacctgcttcagccacgacaccaaatatcttctg
tcctgttcagaagacacaacagttcggctgtgggacttgaacacacatacgaatgtggtg
tgttaccgtggacacgcttatcctgtctgggatatagatgtcagcccagtgggaggcaac
tttgtgagctgttctcatgaccacacagccaaactgtggagcacagaccgcctgtttcca
ctacgaagctatatcggtcactcgtatgatgtagattgtattcagtttcaccccaactca
aactatgtggcgacgggttctagtgacaagacggtgaggttgtggagtgcccaggaggga
aaatctgtgcggctattacagggacatcgtagcggagtcctgtccgtggctttctcaccg
aatggcaaatatttagcttcagcaggagaagaccgacgtatccgagtgtgggatctaggt
agtggtcagctatacaaggagttcaaaggtcatactgatactgtctacgctctcagcttt
aacagagacggatcattactagcctcgggaggactagactgctgtatacgaatctgggac
actaggaaagggagtaacacttgccatggaaacacagcattaactgatggtcatacatcc
tctgagttgctgggtgcatttcccactaaatctgcaaccgtgaatttccttcgttacgcg
gactgcaacttgttgcaggcagctgggcctatctga
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