Liolophura japonica (common chiton): 135464617
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Entry
135464617 CDS
T09976
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA2-like
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
135464617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ljp03021
]
135464617
Enzymes [BR:
ljp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
135464617
Transcription machinery [BR:
ljp03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
135464617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
zf-Sec23_Sec24
Motif
Other DBs
NCBI-GeneID:
135464617
NCBI-ProteinID:
XP_064598141
LinkDB
All DBs
Position
4:5676465..5715958
Genome browser
AA seq
1130 aa
AA seq
DB search
MADTQTLPNYSYTTDKDYGRPKKEQHPPLQELTKPHTDSFNYMLREGLTKAVQNIEPVEF
VLPNDDKIALFIRDATVFSPAVVQTNIHATSLKVYPAECRERGVTYKGRLLVNLVWQVNG
QVMGNTERVIGEVPIMVKSEICNLHKLGPAELIRRGEETEEMGGYFIVNGIERIIRMLIM
PRRNFPMCIVRPSWKNRGNQYTEFGISLRCVTEDQSGANHVLHYLSNGTASLSFTYQKEQ
FFVPVVFILKGLLKVTDKHIYNQLIAGREDDSFYRGCVIFMLRQALDEGLTNQKTVLKHI
GERFRPKLRKPEWYSDEDLGRHLFRHCVCFHLHSNVEKFNLLVYMTQKLFVFAKGGCATE
SADNPMNQEVLLGGHLYLMVLKEKIESWLHSLRTSIERTAKGKGTALDVNLGTISDACRH
GLEVTKPMEYLMATGNLVSRTGLGLMQATGLTVVADKLNFMRYISHFRCIHRGAFFAQMR
TTAVRKLLPEAWGFLCPVHTPDGTPCGLMNHMSALCQIVNIQFRVAHLPRVLVALGICPF
DGPLPAPVKECYTVLLDGKVCGYVPDEHAQDLERRLRVMKVQGQEKIPPLIEICLVPKTK
VASQYPGLYIFTGLARMMRPVTNLALNKVEMIGTFEQVYMNIAIVPEEMEVAVTTHQELN
EQSMLSAVASFTPFSDFNQSPRNMYQCQMGKQTMGTPLHAFTHRADNKLYRILFPQTPMV
RPIIYDQYKVDNYPLGTNAIVAVISYTGYDMEDAMCLNKASYERGFAHGVIYKSEFIDLN
GKVSLVFGCKPGEKGSDRLNEDGLPPVGIYLEEGDPYYSYINIQTGECRVVKYKHQEPAY
VEQIKILANDSGTTELQKVCIVLRMPRNPIIGDKFASRHGQKGICSMKWPVENMPFTESG
MVPDIIFNPHGFPSRMTIGMMIESMAGKSGACHGLCHDATPFQFSEEHPAIHYFGDLLTA
AGYNYYGTERLYSGIDGREFEADIFIGVVYYQRLRHMVSDKFQVRTTGPIDNLTHQPVKG
RKRAGGIRFGEMERDGLIAHGTAFLLQDRLLNCSDRSQVHLCTRCGSILSPTMEKPVSSS
AVASYEMTRHWKCGVCESREHIELITVPYVFRYLVAELAAMNIKVELEVT
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggcagatacacagacattaccgaactatagctacacgaccgacaaagactatggaagg
ccaaagaaagaacaacatcccccattacaagagctgacaaagcctcatacagactccttt
aattacatgttgcgagaaggactgacgaaagcagtacagaacatagaaccagtagagttt
gtccttcccaatgacgacaagattgcgcttttcattagggatgcgacagtgttcagtccc
gcagtggtgcaaaccaacatccacgccacctccctgaaggtctacccagctgagtgtcga
gaacgtggggtgacctacaaggggagacttttagtgaatttggtatggcaggtgaatgga
caagtgatgggaaacacagagcgagtgatcggtgaagtgccaatcatggtcaagtccgag
atctgtaacttacacaagctgggtcctgcagaactgatacgtcgtggggaagaaacagag
gagatgggaggatatttcatcgttaacggaatagaaagaattatccgtatgctcatcatg
cccaggagaaattttcccatgtgtatcgtacgtccgtcctggaaaaaccgtggcaaccag
tacacagagtttggcatctccctacgctgtgtgacggaggaccagtcaggagcgaaccat
gtactgcattacctatccaacggtacagcctccctaagcttcacttaccaaaaggagcag
ttctttgttccggttgtcttcattctcaagggtctgctgaaggtgactgataaacacatc
tacaaccagctgatagcgggcagagaggatgactctttctacagaggctgtgttatcttc
atgctgaggcaggcattggatgaagggttgaccaatcagaagacagtcctcaaacacatc
ggggaacgattccgtcccaaactgcgaaaaccagagtggtactctgatgaggatcttggg
agacatttgtttcgacattgtgtgtgctttcatctccactccaatgtggaaaagttcaac
cttttagtgtacatgacacagaaactgttcgtgtttgccaaaggtggctgtgccacagag
agtgcggataatcccatgaaccaggaggtgctgctagggggtcatctctacctcatggtg
ctcaaggagaagatagaatcttggcttcattctcttaggacatccattgaaaggacagcc
aaaggaaaaggcactgctttggatgtaaacctgggtacaatttctgatgcatgtcggcat
ggcctagaggtgaccaaacccatggagtatctcatggccacagggaacctggtatccaga
acaggactgggccttatgcaggccacaggtctgactgttgtagccgacaaactgaacttc
atgcgttacatatctcacttccgatgtattcatcgcggagcgtttttcgcacaaatgagg
acgacagccgttcgtaaacttctacccgaggcctggggtttcctgtgccccgtacacaca
cccgatggaaccccctgtggactgatgaaccacatgtctgctctctgccagattgtgaac
attcagttccgtgtggcccacctcccgagagttctcgtggcattagggatatgcccgttt
gatgggccattaccagctcccgtgaaggaatgctacactgtgctgctggatgggaaagtc
tgtggctacgtccccgatgaacatgcgcaggatttagagcgaaggttacgggtcatgaag
gttcaaggtcaggaaaagattccaccactgatagaaatctgtcttgtgcccaaaacaaaa
gtggctagtcagtacccaggattgtacatctttaccggcttagcgcggatgatgagaccc
gttacaaacctggcgctgaataaggtggagatgataggcacatttgaacaagtttacatg
aacatagccatagtaccagaggagatggaggtagccgtaacgacccaccaggagcttaat
gagcagagcatgctgagtgccgtcgccagctttacacctttttctgacttcaaccaaagt
cccaggaatatgtaccagtgtcagatgggtaaacaaacgatgggcacacctcttcatgcc
ttcactcaccgcgcggacaacaaactgtacaggatcctcttcccacaaacccctatggtc
cgaccaatcatctatgaccagtacaaggtggataactacccgttgggaaccaacgctatt
gtggctgtcatctcgtacacgggctacgacatggaggatgcaatgtgtctgaacaaggct
tcatatgagagaggttttgctcacggggtgatctacaagtcagagttcatagacctaaac
gggaaagtcagcttggtatttggctgtaagccaggtgagaaggggtcggataggttaaac
gaggatggactgccaccggtggggatttacctggaggagggtgacccttactacagctac
attaacatacagacaggagagtgcagggtggtgaagtacaaacatcaagaaccagcctac
gtggagcagatcaaaatcctggctaacgactcggggacgacggaactacagaaagtctgc
attgttctgcgaatgccgagaaaccccatcataggggacaagtttgccagccgacatggt
caaaaaggaatctgcagcatgaagtggccagtggagaatatgcctttcacggagtctggg
atggtacctgatatcattttcaaccctcatggattcccctccagaatgaccattggcatg
atgatagagagcatggcagggaagtctggggcatgtcacggtctctgccacgatgctact
ccattccagttttctgaggaacaccctgccatccattactttggggatttgctgactgct
gctggttacaattactacgggacggagcgtctgtactcggggatcgatggacgggagttt
gaagcggacatcttcataggggttgtatactaccagagactaaggcacatggtttcggac
aagtttcaggtacgaacaacaggtcctattgacaatcttacgcatcagccagtcaaggga
cgcaagcgcgcaggagggatacgttttggggagatggagcgtgatggtctcattgcccac
gggactgcttttctactacaggatcgtctcctgaactgctctgacagatcacaggtgcac
ctctgtacccgctgcgggagcatcctctccccgaccatggagaagccagtctcgtcctca
gccgtggcgtcgtacgaaatgacacggcactggaagtgtggcgtgtgtgagtcgcgcgaa
cacatagaactgatcacagtgccctacgtgtttaggtacttggtggcggagctcgctgcc
atgaacataaaggtggagctggaggtgacgtga
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