Liolophura japonica (common chiton): 135464804
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Entry
135464804 CDS
T09976
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03018
RNA degradation
ljp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135464804
09123 Folding, sorting and degradation
03018 RNA degradation
135464804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljp03019
]
135464804
03041 Spliceosome [BR:
ljp03041
]
135464804
Messenger RNA biogenesis [BR:
ljp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135464804
mRNA degradation factors
5'-3' decay
Lsm complex
135464804
Spliceosome [BR:
ljp03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
135464804
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
RimP_C
Motif
Other DBs
NCBI-GeneID:
135464804
NCBI-ProteinID:
XP_064598429
LinkDB
All DBs
Position
4:3799843..3805769
Genome browser
AA seq
89 aa
AA seq
DB search
MTTFTNPSQLLPLELVDKCIGHRIHIIMKNDKEIVGTLLGFDDFVNMVLEDVTEFESTPE
GRRVTRLDQILLNGNNITMLVPGGEGPEV
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgacgactttcacaaacccgtctcaacttttgccactcgaactggtggacaaatgtata
ggacacagaattcatatcatcatgaaaaatgacaaagaaattgttggaacgcttttgggc
tttgatgattttgtcaatatggtattggaagatgttacagaatttgaaagcacaccagaa
ggcagacgggttaccaggttagaccagattttgttaaacggcaacaacataacaatgttg
gtgccaggtggagaaggtcctgaagtgtga
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