Liolophura japonica (common chiton): 135465402
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Entry
135465402 CDS
T09976
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ljp03041
]
135465402
Spliceosome [BR:
ljp03041
]
Common components
Common spliceosomal components
General mRNP proteins
135465402
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RBD_DEAH11
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
135465402
NCBI-ProteinID:
XP_064598704
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All DBs
Position
5:1586329..1599767
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AA seq
572 aa
AA seq
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MADDFDVEAMLEAPYKKEDEGKAVGSSDKHKKKKRSRSKDRDRKRSRSRSRERSRREKSR
RSRSRDRRDKKRSPPRRRSRSRDRDSHKRKSRSKSPIYRFGRPPRDRRGNRSRSRSPLRK
EPLPELTPEERDARTVFCMQLSNRIRPRDLEEFFSSVGKVRDVRLITDNKTRRSKGISYV
EFEDTESVPLALGLAGQKLLGVPIIVQPSQAEKNRLANAANNLQKGNSGPMRLYVGSLHF
NITEEMLRAIFEPFGKVDDIKLIRDHETSRSQGYGFITFGDAEEAKKALEQLNGFEVAGR
PMKVNHVTERTAESQGNSLLDSDEMDRAGIDLGATGRLQLMAKLAEGTGFQIPQYAASAL
SMNSSGTDSDLGAPAPVAPPVTQTPAPAQAQNATAPPIATQCFMFSNMFDPTSETNPNWD
QEIRDDVIEECNKHGGVLHIYVDKASPQGNVYVKCPSIAAAVASVNALHGRYFAGKVITA
AYVPLPNYHGLFQTQXSSNQLLVPSTQLLQCRVAWRSCCPWDGAVVQASYTLTGCTQTFT
IQTLIIITVLSVCSPSGDRKHRKLSSSEVLHN
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgattttgatgtggaagctatgctggaagccccttacaagaaggaggatgaa
ggcaaagctgttggatcctccgacaaacacaaaaagaagaagcgaagccgcagcaaagac
agggatcgtaagaggagcaggagtaggagccgagaacggagccgtcgggaaaaatcacgt
cgaagtcgaagccgtgatcgccgagacaaaaaacgcagtcctccacggaggcgcagccgt
agtcgagaccgtgattctcacaaacgcaaaagccggagcaagtcgccaatctaccgattt
ggtaggcctccacgggacaggaggggtaacaggagtaggagcagaagtcctttgagaaag
gagccattacctgagcttacaccagaagagagagatgccagaacagtattttgtatgcag
ttgtcaaacagaattcgcccaagggatttggaggaatttttttcttcagttggaaaggtg
cgagatgttcggcttatcacagacaataagaccaggcgctcgaagggcatttcctatgtg
gaatttgaggatacagagtccgttcctttggctctggggctggctggacaaaaactactt
ggagtccccatcattgtccagccatcacaagcagagaagaatcgattggctaatgctgcc
aacaacctccaaaagggcaactcaggccccatgaggctgtatgtgggctctctacatttt
aacatcacagaggaaatgttgagagcaatttttgagccgtttggaaaggtggatgatatc
aagcttatcagagatcatgaaacatcacgctcccagggttacggttttattacatttggt
gatgctgaagaggcaaagaaagctttggagcagttgaatgggtttgaagtggctggacgt
ccaatgaaggtgaaccatgtgacagagaggacagcagagagccaggggaactcactgctg
gacagtgatgaaatggacagagctggcattgacctaggggctactggcaggctccagcta
atggccaaactggcagaaggtacaggcttccagattccacagtatgcagccagtgcttta
agtatgaactctagtgggacagactctgaccttggagccccagcccctgtggctccccct
gtcacacaaacaccagctccagcccaggcccagaatgctacagctccacccattgccact
cagtgttttatgttttccaacatgtttgaccctacctctgaaaccaacccgaattgggat
caagaaatacgcgatgatgtgatagaagagtgcaacaaacacggaggggttcttcacatc
tacgtagacaaggcttcaccgcagggaaatgtttatgtcaaatgtccaagtattgctgca
gctgttgcttctgtcaatgctctccatggcaggtattttgcaggtaaagtgataacagct
gcttacgttccacttccgaactaccatggtttattccagacgcaannttcgagcaaccag
cttctggtcccatcaacacaactacttcaatgtagggttgcctggcggagttgttgcccc
tgggatggtgcggtagtccaggccagctacaccctgacagggtgtacacaaacattcaca
atacaaacactgatcataatcactgtgctgtcagtgtgttctccttcaggtgatcgaaaa
caccggaagttgtcatcttctgaagtgcttcacaactga
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