KEGG   Liolophura japonica (common chiton): 135465465
Entry
135465465         CDS       T09976                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
ljp  Liolophura japonica (common chiton)
Pathway
ljp03030  DNA replication
ljp03410  Base excision repair
ljp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ljp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    135465465
   03410 Base excision repair
    135465465
   03420 Nucleotide excision repair
    135465465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ljp03032]
    135465465
   03400 DNA repair and recombination proteins [BR:ljp03400]
    135465465
Enzymes [BR:ljp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     135465465
DNA replication proteins [BR:ljp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    135465465
DNA repair and recombination proteins [BR:ljp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      135465465
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE DNA_pol_B_exo2 RNase_H_2 APP_N
Other DBs
NCBI-GeneID: 135465465
NCBI-ProteinID: XP_064598776
LinkDB
Position
5:11943137..11993588
AA seq 2018 aa
MQTDQIDSRFGFDRYTDPQERTGWLVNMHSADILDEDKRLISAVDFYFIEDDGGRFKVSL
PFKPYFYVATKKDCEREVASFLTKKFSGKLAKVETVAKEDLDLANHLVGLQRNYLKLSFF
SVDELMKVRRDILPAVRKNKEREKSAESYTVMLTSHLTGEDSGGVSKRISDQMDNIIEVR
EYDVPYHVRVSIDLKIHVGLWYSVKGRGSGAPEIRHRDDLVDRPDPVVLAFDIETTKLPL
KFPDAQTDQIMMISYMIDAQGYLITNREIVSEDVEDFEYTPRPEFEGPFIIFNEPDEMAL
IQRFIDHILEVKPHIFVTYNGDFFDWPFVEARAAFHGIDLTREIGFQKDSQGEYHSSASS
HMDCLKWVKRDSYLPVGSQGLKAVAKAKLRYDPVELDPEEMCRMASEEPQVLSNYSVSDA
VATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQETV
YNKLTEDGHVLDSETYVGGHVEALESGVFRADIPCRFRMVPEAFQMLIEKVDRTMKHAIE
VEEKIPLEHVTNFDEVCKDIVEKLSNLRDCPNRLENPIIYHLDVGAMYPNIILTNRLQPP
AIVDEVTCAACDFNKPGALCQRKMPWMWRGEYMPASRGEYQRIQQQLENEKFPPMMPGGP
PRAFHQLTREEQATVEKKRLAEYCRRAYKKVHITRKEEREATICQRENSFYVDTVRAFRD
RRYEFKGLCKVWKQKLGEAEKSKDAAEIKRANGMLVLYDSLQLAHKCILNSFYGYVMRKG
ARWYSMQMAGIVCFTGANIITEAREIVEQIGRPLELDTDGIWCVLPASFPENYVIKTTLP
KKPKVTISYPGAMLNIMVKERFTNDQYQDLVDPERLEYSVHSENSIFFEVDGPYLAMILP
ASKEEGKKLKKRYAVFNFDGSLAELKGFEVKRNGELQLIKIFQSSVFEAFLKGTTLEECY
SAVAKIADYWLDVLYSKAANMPDSELFELISEKRNMSRKLEDYGGQKSTCISTAKRLAEF
LGDQMVKDAGLNCKFIIAKKPEGAPVTERAIPLAIFQAEPSVKRHFLRKWLKSPGMVEFD
MREILDWQYYIERVGGTXQKIITIPAALQQVSNPVPRIPHPDWLRKKLLERMDVFKQKKI
SELFAPAPKPQPQDDSEDLFTQPEAPEADSSVADIEDIGGKDRQKTLPVAMAGKRKRQHS
SQESGVNSQNSELSQTWREILGPPPPMGTTVEERNVWIRYHKKKWELQAKERQERKRRRV
DFGDISGVRAPAGPRSGLGGFLRRKARSIMDMPWQIVQMASTEQPGQFKLWALIGSDLHA
MKLVIPRIFYVNQKTPKTGEGALWKKVNKTLPRSHPVFNLYEYSVPEEVYQKHINEINAD
LSSPDIEGVYETQVPPLFRAMVRLGCVTTVNRDFAKFMAGKDIDTFELDQLQFRTLAQFS
YLEPGTMKYVYLYSHSCGQKMMFGLFFPLSKKATLFVVDTVRSDQMPNLTAMYNTERNVK
LTKGADDTMLPPGNHAFDVKHEKDVRQVYRAIQRLLSAYRDEKRGPTFIAVQSQQDFQHL
TSAMPGIGDFPLVPVNISDSEGLYNVLDWQRVGSKRIIQHYLNIDIILQAMMEQCRYFHI
PIGNMPRDVTIFGCDLFLARHLQKHNHLLWCSPTDRPDLGGKEADDNRLCSEFEEGQTLD
VNNPGSYPTVCVELDLASLAVNTIIESSHVNDREGASVVSFDQLPQASLEDMMQGQGAAM
MMTSYDETALCSATFRIMKSMVHGWVRDVTAHGNVFADNQIIHFYRWLRSSSSLLYDPAL
RRTLHNLMKKDFMQLIAEFKKLGSTIVYANFNRIILCTKKRRILDAVAYVEYITNSIKSK
ELFHLIDMTYEQCWEFLMWLDVANHGGVKGKLPTLPPEATPIDGERAENSDSDVEIDDCQ
REPEEELNKSDDEDGPEIEMNWNMAKFLPEAAACQTNFNIKDCNMRTYCTCAGEYTTTMS
LEDLGKKLKTFQGIARHYNMEFLLETVTWMLKMNPQIR
NT seq 6057 nt   +upstreamnt  +downstreamnt
atgcagactgaccagattgatagtcggtttgggtttgaccgctacactgacccccaagag
aggacaggatggctggttaacatgcattcggctgacatcctggatgaggataaaagactc
atcagtgctgtagacttttacttcattgaggatgatggaggaaggttcaaggtttcactc
ccattcaagccgtatttctatgtagccacgaaaaaagactgtgagagagaagttgcttct
ttcctgaccaagaagttctctggaaaactggctaaagtggagactgtggcaaaagaagat
ttagatctggccaaccacctggtaggactacagaggaattacctgaagctgtcgttcttt
agtgttgatgagctgatgaaggtgagacgagatattctacctgctgtccggaagaataaa
gagcgagagaaatccgcagaatcttacacagttatgttgacaagtcacttgacaggtgaa
gactcaggaggtgtgtccaaaaggatttccgaccagatggacaacattattgaagtcagg
gagtatgatgtcccatatcatgttcgtgtgtcaatagacctgaagatccatgtggggttg
tggtactcggtcaaaggtcgtggttcgggagccccggagattcgacacagagatgacctt
gtggataggccggacccagttgtgctggcctttgatattgaaacaactaaactcccgctg
aaatttcctgatgctcagacagatcaaatcatgatgatatcttacatgattgatgcccag
ggttatctgatcacgaaccgggagatagtgtcagaagatgtggaagattttgaatacacg
cccaggccagagtttgagggacctttcatcatattcaatgaaccagatgagatggccctc
atccagcgtttcattgatcacatcctggaggtcaaaccgcacatatttgtcacatacaat
ggagatttctttgattggccatttgttgaagccagagctgcattccacggtatagacttg
accagggagattggcttccagaaggactcgcagggggaataccactcatctgcctcatct
cacatggactgtctcaagtgggtgaagagagacagttaccttccagtgggtagtcaggga
ttgaaggctgttgctaaggctaagttgagatatgaccctgtggagctggatccagaggag
atgtgtcgtatggccagtgaggagccacaggtcctgtccaactactcggtgtccgatgcc
gtagcaacatattacctgtacatgaagtatgttcaccctttcatctttgccctgtgtacc
atcatccccatggaacctgatgaggtgttgcgtaaaggctcaggcacgctgtgtgaagcc
ttgctcatggttcaggccttccatgctaacatcatcttccccaacaagcaggagactgta
tacaataagctgacagaggacggccatgttctggactcagagacctatgtagggggtcac
gtcgaggctttggagtctggggtcttccgagcagacataccgtgtcgcttcagaatggtg
cctgaggccttccagatgttgatagagaaagtggacaggacgatgaaacatgccatagag
gtggaggagaaaatacccctggaacatgtcacaaattttgatgaggtgtgcaaagacatt
gtggagaaactatcaaacttaagggactgtcctaacaggcttgagaatccaatcatctac
catctggatgtaggagccatgtaccccaatatcatcctgactaacagactacagcctcca
gctattgtggatgaagtgacttgcgctgcctgcgacttcaacaaaccaggagcgctgtgc
cagaggaaaatgccatggatgtggaggggagagtacatgccagccagtcggggggaatat
caaaggatacagcaacaactggagaatgagaaatttccacctatgatgccaggaggacct
ccacgagccttccatcagctcacgcgtgaggaacaggccacagtcgagaaaaaaagatta
gccgagtattgcagaagagcatacaaaaaagtgcacatcactcgcaaagaggaaagggag
gcaaccatttgtcagcgagaaaactcgttctatgtggacactgtgcgagctttcagggac
agaagatatgagttcaaaggcttgtgtaaggtgtggaaacaaaagctgggggaggcagag
aagagtaaggacgcagctgaaattaaacgagccaatggaatgttggtgttgtacgactca
ctccagttggctcataaatgtattctgaattccttctatggctatgtcatgaggaaagga
gcccgctggtacagtatgcagatggcaggaattgtttgtttcactggtgctaacatcatc
acagaagccagagaaattgtggaacaaattggacgaccgctggagctggatacagatggt
atttggtgcgtgcttccagcctccttcccagagaactatgtgatcaaaacaactctcccc
aagaaacccaaagtgaccatttcttaccccggggccatgttaaacatcatggttaaggaa
cggttcaccaatgaccagtaccaagacctggtggatccagagaggcttgagtactctgtg
cacagtgagaactccatcttctttgaagtggacggtccttatttggccatgatactcccc
gcgtccaaggaggaaggaaagaaactgaagaaacgctacgcggtgtttaactttgatggg
tcactggctgaactgaagggatttgaggtcaagagaaatggagaacttcagcttatcaag
attttccagtcttctgtgtttgaagcttttctcaagggcacgaccttggaagagtgttac
tctgcagtggcaaagatagctgattactggttggatgtcctgtacagtaaggcggctaat
atgccagactcggaactgtttgagctgatttctgagaagaggaacatgtcacgtaagctg
gaggattatggaggccagaagtccacgtgtatcagcacagctaaaaggcttgcagagttc
cttggagatcagatggtgaaggatgcaggactgaactgtaaatttataatagccaagaaa
ccagagggtgcaccggttacagagagagcaatccctctggcgatattccaggcagaaccc
agtgtcaagcgacactttttgaggaaatggcttaaaagccctggaatggtggagtttgat
atgagagagattctggactggcagtattatatcgagcgagtgggaggaactngtcagaag
attatcacaatacctgcagctctccagcaggtatccaaccctgtgccacgcatccctcac
cctgattggctgaggaagaaactgctggagcggatggatgtgttcaaacagaagaaaatc
agtgagctgtttgcacctgcccctaaacctcaaccacaggacgactcagaggaccttttc
acccagcctgaagccccagaggcagacagctctgtagctgacatagaagacattggtggg
aaagacagacagaagacgctgccggttgccatggcaggaaagcgcaaacgacaacacagt
agtcaggaaagcggtgtcaacagtcagaattcggaactctcccagacttggagggagatt
ctggggcctcccccacccatgggcactactgtggaggagagaaatgtgtggatcagatac
cacaagaagaaatgggagctgcaagctaaggagagacaagaacgcaaacgtcgacgggtt
gattttggggacatctctggtgttcgcgcccccgctgggccccgttcaggactgggagga
tttttgcggaggaaggcccgtagtatcatggatatgccttggcagattgtacagatggcc
agcacagagcagccaggacagttcaaactctgggctctgattggctcagatctccatgct
atgaagctggtcataccaaggatattctacgttaatcagaagacccctaaaacgggagag
ggagccttgtggaaaaaggtgaacaaaacgctgccgcgctctcacccggtgttcaatcta
tacgaatactccgtccctgaggaggtctaccaaaaacacatcaatgagattaacgctgac
ctgtcgtcccctgacattgagggtgtttacgagactcaggtaccccccctgttcagagcc
atggtaaggctgggctgtgtgaccactgtcaaccgggatttcgccaagttcatggcagga
aaggacatagacacttttgagctggatcagctgcagtttagaacccttgctcagttttcc
tatttggaacctggaaccatgaaatatgtatatctgtacagccatagctgtgggcagaag
atgatgtttggactgttctttccactgtctaaaaaagcgacgctgtttgtcgtggacact
gtacggagtgatcaaatgccaaacctaacggccatgtacaatactgagaggaatgtcaag
ctaacaaagggcgctgatgacaccatgttgcctccaggtaaccacgcctttgatgtcaaa
catgaaaaggatgttcgacaggtgtacagggccatccagaggctgttgtctgcatacagg
gatgagaaacgtggacccacattcattgctgtccaatcacaacaagatttccagcatctg
acctccgccatgcctggaattggggacttccctcttgtgcccgtgaacatttctgacagt
gagggtctgtacaatgtgctggactggcagagagtgggatcaaagaggatcatacaacac
tacctcaacattgatatcattctacaggccatgatggagcagtgccgctactttcacatt
ccgattggcaacatgccaagagacgtgaccatatttggctgtgatttgttcctagcgcga
catctgcagaaacacaaccatctgctgtggtgttccccaactgacaggcccgacctgggc
ggcaaggaggctgatgataacaggttgtgttctgagtttgaggagggacagactctggat
gtgaacaacccaggctcttaccctacagtctgtgtagagctagatctggccagtctggct
gtcaacaccatcatagagtcttcacatgtgaacgatcgagaaggagcaagtgtggtcagt
tttgatcagttacctcaggcctctctagaggacatgatgcagggtcaaggtgcagctatg
atgatgaccagctatgatgagacggccctatgctcagctacattcaggataatgaaaagt
atggtccatggctgggtgagagacgtgacagctcatgggaatgtgtttgctgataaccaa
atcatccacttctacaggtggttacgctcctctagttccctgttatacgacccagcattg
aggcgaacccttcacaacctaatgaagaaagactttatgcagctaatagcagagttcaaa
aagcttggttccaccattgtgtacgctaactttaaccgcatcatcctgtgtacaaagaag
cgtcgtattctggacgctgtggcgtatgtggagtacattaccaacagtatcaagtctaaa
gaactcttccatctgattgacatgacctatgagcagtgctgggaattcctcatgtggcta
gatgttgctaaccatggaggagtgaagggcaaactgccaactctaccaccagaagccaca
cccattgatggtgaaagagcagagaatagtgacagtgatgtggagattgatgactgtcag
agagaaccagaggaggagcttaacaagtcagatgatgaggatggtcctgaaattgagatg
aactggaacatggccaagttcctgcctgaggcagcggcctgtcagacaaactttaacata
aaagactgcaacatgaggacgtactgcacctgtgcaggagagtacaccactaccatgtcg
ctggaagacttgggaaagaaactcaaaactttccagggaatagccagacattacaatatg
gaatttttgctggagacagtgacctggatgttgaagatgaatccacagatacgatga

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