Liolophura japonica (common chiton): 135465554
Help
Entry
135465554 CDS
T09976
Name
(RefSeq) LOW QUALITY PROTEIN: katanin p80 WD40 repeat-containing subunit B1-like
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ljp04812
]
135465554
Cytoskeleton proteins [BR:
ljp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
135465554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
eIF2A
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_LRRK2
Beta-prop_RIG_1st
Beta-prop_NOL10_N
Ge1_WD40
Beta-prop_VPS8
Cytochrom_D1
UTP15_C
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
135465554
NCBI-ProteinID:
XP_064598866
LinkDB
All DBs
Position
5:complement(8678741..8702952)
Genome browser
AA seq
722 aa
AA seq
DB search
MAHTKRAWKLQEFVAHGSNVNCLALGHKSGRVLASGGEDRKVNLWAVGKPNCIMCLQGHT
TPVEAVRFGHAEEVVVAGSMSGALKVWDLEQAKIMRTLTGHKSGIRCLDFHPYGDYTASG
SLDSNVKLWDIKRKGCIYTYKGHMNRVNCVRFSPDGRWIASAGEDGVVKLWDLTAGKILT
DLKLHEGPVNVVEFHPNELLLASGSSDRTIKFWDLETFQMVSSTDGDCTPIRTIYFHPEG
VCLYSGATNMLKVHSWEPAMCHDSQAMGWGDVSDIAMAQDQVIGASFFGSNISTYVVDAQ
RLQPLGGIPVPQRDASKPNDNLSSLSSHRRSFHADRPPTQSSRQSSIPKENVEEPFQQPD
EVPDDQQSVADIKNPDDYQEHFHQNSRMARKPVRRKTKTRQSFSRNETEPVKLRQGPARV
LVKRSPPPTRRNPPVQRSPPPVRRSPPLVRRSPPPARTSPPSVRRSSPPAVTSPTKPSYQ
PPQEDRVPVADVPSQPAPSEAPGGRAVQKASRSVTPSRREAQKLDPVAAEDFLPKQPDLS
AAGFETSAVTESELLGTLIKGHTAMMTVMANRSRNLQIVRAMWTSGNTKTAVDSALSMND
PAVVVDVLNVLNNKTSLWTLDLCSSLLPHLSDLVGSKYDSYVETALTSVKLILRNMGPVI
KANMVTPPSIGVDISREERHRKCNSCYTHLSSVRGTLEKRPNLQGKLGNLYREVQILIST
LE
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggcccatactaaacgagcatggaaactccaggaatttgtggcccatggctccaatgtg
aactgcttggctttaggtcacaagtccggccgggttcttgcatctggaggggaagaccgc
aaagtcaacctatgggctgttggcaagccaaactgtatcatgtgcttgcaagggcacacc
actccagtggaagctgtgcggtttggccatgcagaagaagttgtggtggcaggctccatg
tcaggagccctaaaagtttgggacttggaacaggcaaaaattatgcgtacgctgacgggt
cacaagtctggaatccggtgtttagatttccatccttacggtgactacactgcatcaggt
tctttagatagcaatgttaagttatgggatatcaaaaggaaaggctgcatatatacgtac
aaaggccacatgaacagagtgaactgtgttagatttagccctgatggtaggtggattgct
tcagcaggtgaagatggtgttgttaagctatgggacttgacagcgggtaaaatactgaca
gatctgaaacttcacgaaggcccggtgaacgtggtagagtttcatcctaatgaactctta
ctggcttcaggcagctctgatagaacaataaagttttgggatctggaaacattccaaatg
gtcagttcaactgatggagactgtacacccatcagaactatttatttccatccagagggg
gtatgtttgtacagtggggccacaaacatgttgaaggttcacagctgggaaccagccatg
tgtcatgactctcaggccatgggctggggcgatgtcagtgatatagccatggcacaggac
caagtgattggagcctctttttttgggtccaacatttccacatatgttgtagatgcacag
aggttacagccactaggagggattcctgttccacagagagatgccagtaaaccaaatgac
aacctgagttctttgagtagccacagaaggagtttccatgccgaccgtccaccaactcag
tcgtccagacaaagcagcattcccaaagaaaatgttgaggagccttttcaacaacctgac
gaagttcccgatgatcaacagtcggtagctgacattaaaaaccctgatgattaccaagag
cattttcatcagaactccagaatggctcgaaaaccagttcgtaggaaaaccaaaactcgc
cagagtttttctcgcaatgaaacagaaccagtgaagctccgacagggacctgcaagggta
ctggtaaagcgctctccacctccaacacgtaggaaccctccagttcaacgatcgccacca
ccagtgcgccgctccccaccccttgtccgccgctccccacctcctgcccgcacttcacct
ccatcagtgcggagatcctcgcccccagctgtaacgtctccaacaaagcctagctatcag
ccgccccaagaggatcgagtgcctgttgctgatgtgccctcccagccagcgccgagtgag
gccccagggggcagggctgtgcagaaagcttccagaagcgtgaccccatctcgcagagaa
gcccagaaattggaccctgtggctgcggaggacttcctaccaaaacagcctgacctgtca
gctgctggatttgaaacctctgccgtcaccgagtcagaactattgggtaccctcatcaag
ggccacacagccatgatgactgtcatggccaaccggagtaggaatttgcagatagtccgt
gccatgtggacctctggcaatacaaagacggcagtagattcagccttaagcatgaatgac
ccagctgtggtggttgatgtgctgaatgtgctcaataataaaacatcattgtggacttta
gatctgtgttccagtttattgcctcacctgagtgatctggtggggagtaaatatgacagt
tatgtggaaacagccctaacatcagtcaagttgattctgcgtaacatgggcccagtgata
aaggctaacatggtcacccctcccagcataggggtggacatctccagggaagagagacat
cgcaaatgtaacagctgttatacccacctgtcgtctgtcagaggaacgctggagaagagg
ccgaacttacagggcaaactgggcaacctgtacagggaagtacagatactgatatccaca
ctggagtag
DBGET
integrated database retrieval system
