KEGG   Liolophura japonica (common chiton): 135465686
Entry
135465686         CDS       T09976                                 
Name
(RefSeq) negative elongation factor D-like
  KO
K15181  negative elongation factor C/D
Organism
ljp  Liolophura japonica (common chiton)
Pathway
ljp03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ljp00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    135465686
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ljp03021]
    135465686
Transcription machinery [BR:ljp03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     135465686
SSDB
Motif
Pfam: TH1 CATRA-C
Other DBs
NCBI-GeneID: 135465686
NCBI-ProteinID: XP_064599061
LinkDB
Position
5:complement(18787274..18810415)
AA seq 593 aa
MADYDEGDDTDNMWRDGDMDDDAGMGSPYRGDEDYMDAGEDDDEEEDEAVVQQECLSSFA
SKDYIMEPCISAMLKRFLQAGGSPERVVELLSDNYTAVAQTVNLLAEWLIQAGADIREVQ
EMVESHLKNMVLRHFDPKKADSIFSDEGETPSWLAEMIDHQPWRELFYRLAEEYPDCLML
NFTIKLISDAGYQGEITSVSTACHQIEVFSRVLRTSISSLLDGGEDAIEKNLPEFTKMVC
HGEHTYLYSQVLMHILSQETKGGSNIKRLCQELQKGASQRGFDVTPITMALNGASAYPRA
CQALSSMLSRKALNPADITILFKMYSEANPPPVELIRVPTFLDLLIECLFKPNFRINPEH
KSKYMFILSYASSIAEVYKKGVRKSINKEDLKATVQSVEKAHTLCSVSKGSSELMTEIGA
LFQCIKFPVVAMGVLKWVDCTVSEASYFKLNTDHTPLHLVLLDEIVTCHMLLHGKSLDLL
VRLFESAYEELDVLVRLELKKTLLDRMVHLFSRGCVIPVVTYIRKCLEKQDTDISLIRYF
VTEVLDVIAPPYTSEFVQLFLPLIENEEITGLLKTDDGNDAVSEFLSHCRSNY
NT seq 1782 nt   +upstreamnt  +downstreamnt
atggcagattacgatgaaggcgatgacacggataacatgtggagagatggcgatatggac
gacgacgcaggaatggggtccccatacagaggagatgaggactacatggatgctggggaa
gatgatgatgaagaagaagacgaggctgtggtacagcaggagtgcctctctagctttgcc
agtaaagactacatcatggaaccatgcatatctgcaatgctgaagaggttccttcaggcg
ggagggtccccagagagagtggtggagttgctgtcagataattacactgccgttgctcag
accgtcaatcttctcgcagagtggttgatacaggctggagcagacatccgagaggtccag
gaaatggtggaatctcatctcaagaatatggttctccgacattttgaccctaaaaaggca
gactctattttctcagatgagggagagaccccgtcctggctggcggagatgattgatcat
cagccgtggcgagagctgttctacagactggccgaggaatacccagactgtctgatgctc
aatttcactatcaagctgatctcagatgctggataccaaggggagataaccagtgtgtca
acagcatgtcatcagattgaagtgttctctcgtgtcttgaggacatcaatctccagtttg
ttggacggtggggaggatgccattgagaagaatctcccagagtttacgaagatggtatgt
cacggggagcatacctatttgtacagccaggtcttgatgcatatattgtctcaggagaca
aagggagggtcaaatataaaacggctgtgccaggaactgcagaagggggctagtcagaga
gggtttgatgtcacaccaatcacaatggccctgaatggagcctcagcataccctcgagca
tgtcaggctctctcctcaatgctgtccaggaaagctctgaacccggcagatatcaccatt
ttattcaagatgtactctgaggcaaaccccccacctgtggagctgatcagagtacctacc
ttcctggatttactcatcgagtgtttatttaaacctaacttcagaatcaaccctgagcac
aagtccaagtacatgttcatcttgtcctatgcttccagtattgctgaggtctacaagaag
ggagtcaggaagagcataaacaaagaggacctgaaagcgactgtacagtctgtggagaag
gcacataccctgtgtagtgtgagtaaggggtcctcagaactgatgacagagataggagca
ctgttccagtgtatcaagttccctgtggttgccatgggtgtgttaaaatgggttgattgc
accgtgtcggaggccagttatttcaagctgaacactgaccacacaccgctacatctggtc
ttactggatgagattgtcacctgtcacatgttgttacatggcaagtccttggacctcctg
gtccgtctgtttgagtcagcatatgaggaactagatgttcttgtgaggttggagttgaag
aagacattgctggatcgtatggtgcatttgtttagtcgtggttgtgtaatccctgtggtg
acgtacattcgcaaatgtctggagaaacaagacacggacatctctctgattcgttatttt
gtgacagaggtcctagatgtcatagctcccccctatacatcagaatttgttcagctcttt
ttgcctctgatagaaaatgaagaaatcactgggttgctgaaaacagatgatggaaatgat
gctgtgtcagagtttttatcccattgtcgttcaaactattga

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