Liolophura japonica (common chiton): 135465692
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Entry
135465692 CDS
T09976
Name
(RefSeq) cleavage stimulation factor subunit 1-like
KO
K14406
cleavage stimulation factor subunit 1
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135465692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljp03019
]
135465692
Messenger RNA biogenesis [BR:
ljp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
135465692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML_2
CSTF1_dimer
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_VPS8
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_HPS5
B-prop_COPA_B_2nd
Beta-prop_WDR35_TULP_N
PROPPIN
Ge1_WD40
RMC1_N
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_NWD2_C
Cytochrom_D1
VPS8_N
Beta-prop_RSE1_2nd
Beta-prop_LRRK2
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
135465692
NCBI-ProteinID:
XP_064599071
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Position
5:3272244..3288816
Genome browser
AA seq
428 aa
AA seq
DB search
MSDLSLKDRELMYRLIISQLYYDGYQEVATNLVAACNPSTASCPPSERLFKIVGMGLRLE
EDQQNKNNFEVVAPGTGIDLEFETDVQTISPEAALYETCYVTAHKGACRAGAFHHTGMLI
ATGSEDASIKILDVERMLAKSATPAEIIAMETPQQTMENHPVIRTLYDHNAEVTCIDFHP
VHQILASGSKDYSVRFFEFSKPSVKKAYKSIQEAAIVRCLSFHPSGEFLLVGTQHPTIRL
YDVNTFQCYVANNPAEHHKGPITSVKYCSSANLYASSSKDGDIKLWDGVSNKCINTFHKA
HEGHEVCSVVFSRNSKYILSSGKDSMVKLWELSTSRCLIMYTGAGATGRQEHRTSAVFNH
TEDYVLYPDEKTTSLCCWDSRNAERQKLLALGHNASVRQITHSPTGPAFITCSDDFRARF
WYRKATTD
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatctctcactgaaagatagggagctgatgtacaggctgataattagtcagctg
tattatgacggttaccaggaggtggccacaaacttggtagcagcttgtaatccatcaaca
gcttcatgtccgccctccgagcgccttttcaaaattgttggtatgggcctaagactagag
gaagatcagcaaaataaaaacaactttgaagtggtggcaccaggaacagggattgatctt
gagtttgagactgatgtgcaaaccatatccccagaagcggcgctctacgagacttgctac
gtgacagcccacaagggcgcatgcagagctggagccttccatcatacaggaatgctgata
gcgacaggttcagaagatgcctccattaagattcttgatgtggaacgtatgttggctaag
agtgctacccctgcagagataatcgccatggaaaccccccaacagacaatggagaatcac
ccagttattcgcacattgtacgaccacaacgctgaagtgacgtgcatcgactttcaccca
gtacatcagatccttgcttcaggtagcaaagattacagtgtccgcttcttcgagttttca
aaaccctccgttaaaaaggcctacaaaagcattcaagaagctgcaattgttcgctgtttg
tcatttcatccatctggggagtttttattggttggaactcaacatcccacaattcggtta
tacgatgtgaacacattccagtgctatgtcgccaataatccagcagagcatcacaaaggc
cccataacttctgtaaagtactgctccagcgccaacctgtacgccagcagttccaaagat
ggagatatcaaactgtgggacggtgtcagcaacaaatgtatcaacacattccacaaggcc
cacgaaggccatgaagtttgctctgtggtcttctccagaaactcaaagtatatcctgtcc
agtggtaaggactccatggtgaaactgtgggagttgtcaacaagccgttgcctgatcatg
tatacaggtgccggggccactgggagacaggaacacagaacctcggccgtcttcaatcac
acagaggactacgttctgtacccagacgagaaaacaaccagtctctgctgttgggattcc
agaaatgctgaacgacaaaaactgctggctttgggtcataacgccagtgtccgtcagatc
acacactccccgacaggccccgccttcatcacctgtagcgacgactttcgtgctcgtttc
tggtacagaaaggccacaacggactga
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