KEGG   Liolophura japonica (common chiton): 135465819
Entry
135465819         CDS       T09976                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
ljp  Liolophura japonica (common chiton)
Pathway
ljp03020  RNA polymerase
ljp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ljp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    135465819
  09124 Replication and repair
   03420 Nucleotide excision repair
    135465819
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ljp03021]
    135465819
   03400 DNA repair and recombination proteins [BR:ljp03400]
    135465819
Transcription machinery [BR:ljp03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     135465819
DNA repair and recombination proteins [BR:ljp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      135465819
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4
Other DBs
NCBI-GeneID: 135465819
NCBI-ProteinID: XP_064599243
LinkDB
Position
5:10388358..10394863
AA seq 141 aa
MASNAALPNEAPEEDASELQFPKEFENAETLLISEVQMLLEHRKQQNESAEEEQELSEVF
LKTLNYTQRFSKFKNRETIAAVRSSLMQKKLHKFELAALANLCPENAEEAKSLIPSLEGR
FEDDELQQILDDIKTKRSFQY
NT seq 426 nt   +upstreamnt  +downstreamnt
atggcgtcaaacgcagcactgccgaatgaagcgccagaagaagatgcctcagagctgcaa
tttcccaaagaatttgaaaatgctgaaacactcctgatttctgaagtgcagatgttatta
gaacacagaaaacagcagaatgagagtgcagaagaagagcaggagttgtctgaagtgttc
ctcaagactctgaattacacccagcgattcagcaaattcaaaaacagagaaaccatagca
gctgttagaagttctctgatgcagaagaagttacacaagtttgagttagcagcactggcg
aacctttgtcctgagaacgcagaagaggctaagtcccttatccctagcttagaagggcgt
tttgaagatgatgaattgcaacaaatcctggatgacatcaaaacgaaacgcagcttccag
tactga

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