Liolophura japonica (common chiton): 135465889
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Entry
135465889 CDS
T09976
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
ljp
Liolophura japonica (common chiton)
Pathway
ljp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
135465889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ljp03400
]
135465889
DNA repair and recombination proteins [BR:
ljp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
135465889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_III
MutS_IV
MutS_II
MutS_I
Motif
Other DBs
NCBI-GeneID:
135465889
NCBI-ProteinID:
XP_064599331
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Position
1:complement(93961793..94000907)
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AA seq
752 aa
AA seq
DB search
MAVQPKQDLQLDSAQEQGFLSFHRSLPLKSSTTLRVFERTDYYTVHGSDAVFVAKEVFKT
SGVIKYLGHGEKRLESVVLSKLNFESLVRDLLLVRQYRVEVYRNKASGKNNDWVHAFKAS
PGNLTQFEDILFGNNDMSTSSGVLAVKLGSEEGQRIVGVAFADPTLRKLSVCQFTDNDQF
SNLEALIVQLGPKECLISGSSGEATPDRSRLLQVLNRSGLLITERKKAEFTTKDNVQDLN
RLVKFKKGEQPNSSALPEMDKCHAMSCISSLIKYLELLSDEDNFNQFSLTSFDLDQYLRL
DAAAVRALNLLPNSLEGGNKNQCILGLLNKCRTAQGQRLLSQWVKQPLVDINRIEERLNI
VESFMEDTELRQILQEDQLRRIPDFQRLSKKFQRKKANLQDCYRVYQGLDKMPYLLEAFG
ETWGQAQELTNGSFTNPMKELLMDFSKYQEMVEATVDLSQVENHEYLIKPDFDEGLTGLR
ERMDELEESIKAQLNKAARDLSLEPNKTLKLESNAQLGYFFRVTRKEERCLRNNKNYITI
DTNKNGVRFHNSALRKLNEEYLQIKEDYNEQQKSVVTEVITIAGGYVEPMCLLNDVIAQL
DVLVSFAYVAAGAPVPYIRPKLHQKGQFIAPMFVLNVWLFDYCGRSYSEKLYTVTVAQYK
VKFISRNRTLNAYTCTGVTCVTNNTISRNRTLHAYVCTGVTCVTNNTISRNRTLHAYVCT
GVKCVTNNTILRNRNLHAYEILTPLEISSEAI
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggcggtacaacctaaacaagatctgcagctagattctgcccaagagcaaggcttcctg
tctttccaccgctctcttcccttgaagtccagcaccacccttcgtgtgtttgagagaacg
gactactacacagtgcatggatctgatgctgtgtttgtggcaaaggaggtgtttaaaaca
tcaggagtgatcaagtacctgggtcatggtgagaagaggttagagtcggtggtcctgagt
aagctgaactttgagtcactggtcagagatctgcttctggtgcgtcagtaccgtgtggag
gtctacaggaacaaagcgtcgggcaagaacaatgactgggtgcacgccttcaaggcatcc
cctggaaacttaacccagtttgaggacattttgtttgggaacaatgacatgtccacatcg
tctggggtgttggctgtaaagctgggatctgaggagggacagagaattgttggtgttgct
tttgctgatcctaccttgaggaagttgagtgtttgtcagtttacagacaacgatcaattt
tccaacttggaggcattaattgttcagcttggaccaaaggagtgtctgatctctggcagt
tcaggggaagctactccggatagaagcagattactgcaagttctcaaccgtagtggcctg
ctgataacagagaggaagaaagctgagttcacaaccaaagacaatgttcaagatttgaac
aggctggtgaagttcaaaaagggagagcagccaaacagctcagcactaccggagatggac
aaatgccatgccatgagctgtatctccagtctcatcaaataccttgagttgttatcagat
gaagataattttaaccagttcagcttgacatcgtttgatttggatcagtatttacggcta
gatgcagctgctgtcagagccctgaacctgctgcctaactctctagaaggtgggaataag
aaccagtgcatcctgggactgttgaataaatgtcggacggcccaaggtcagaggctgttg
tcacagtgggtaaaacagccactggttgatatcaataggatagaggagcgactcaatatt
gtggagtcattcatggaagacacagagttacgacaaattctacaggaagatcagctgcga
agaattcctgatttccaacgcctttccaaaaaatttcagcgaaagaaagccaacctgcag
gactgctatagagtgtatcaaggcctggacaaaatgccatatttgttagaggcgtttgga
gaaacatgggggcaagcacaggaacttactaatggaagtttcacaaatcctatgaaggaa
ttgttgatggacttcagtaagtaccaggaaatggtagaggcaacagttgacctgtcccag
gtggaaaaccatgagtaccttataaagccagactttgatgaaggactgaccggtctccgt
gaacgtatggatgagttagaggaaagcatcaaggctcagttgaacaaggctgctcgtgat
ctctctctggaacctaacaagaccctcaaacttgagtctaatgcacaactgggatatttc
ttccgtgtcacacgaaaggaagaaagatgtttgagaaacaacaaaaactacatcactata
gacaccaataaaaacggagtacgttttcacaacagtgccctgaggaagctaaatgaggag
tatcttcaaataaaggaggattacaacgaacagcagaaatctgttgttacagaagttatc
actattgcaggtggctatgtggagccgatgtgtctgctcaatgatgtcatagctcagttg
gacgttcttgtaagctttgcctatgtagcagcaggtgctcctgtcccatacatcagaccc
aaactgcatcagaaaggtcagtttatagctcccatgtttgtgttaaatgtgtggttattt
gattattgcggaagatcatactcagaaaaactttatacggttactgtggcccagtacaaa
gtcaaattcatctcaagaaacagaactctaaatgcatatacatgtactggtgtaacgtgt
gtaactaataacactatctcaaggaacagaactctacacgcatatgtatgtactggtgta
acatgtgtaactaataacactatctcaaggaacagaactctacatgcatatgtgtgtact
ggtgtaaagtgtgtaactaataacacaatcttaagaaacagaaatctacatgcatatgaa
atactgacacctttggaaatcagttcagaagcgatatga
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