Liolophura japonica (common chiton): 135465923
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Entry
135465923 CDS
T09976
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9-like
KO
K18735
protein SMG9
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljp03019
]
135465923
Messenger RNA biogenesis [BR:
ljp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
135465923
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_29
MMR_HSR1
NB-ARC
RsgA_GTPase
MeaB
Motif
Other DBs
NCBI-GeneID:
135465923
NCBI-ProteinID:
XP_064599378
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Position
1:complement(94146681..94167118)
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AA seq
494 aa
AA seq
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MADSDRDRGGRRRRHRGRRRERPGEREVDEGSVVSVTTPSKPPIILAKPPSERGLDDSPS
SGSSTLSSSMMTTTHRSADKPVVMLRSRDEGRSMPSANLPSIPSALLSGEMHVGQGYHGH
PRSVISGHPTVREGAQSSRPLNLPDVQGSVKLVDENWQWCDKGMEMLLDQTDYLVVGVVG
LQGVGKSTLLSLLVGNSTSDSPRSFTFPPESKDGRENGCHQTRGIDMYVTGERIIYLDTQ
PVLSASVMDHLIHHEKKYPTEFTSVENCVHMQSLQLAAFLMTVCNVVLVVQDWFADLNFL
RFLLTAEMLKPASPSGSSQESGSNPEDSDDYHPHLVFVQNQASREDFSMDTFRSYQQTLS
MLFRDSKLRCKGSLTLANGSVISGLNRKTIRSDVNLFLLPSYDTATSFDRDSILTLLPEY
RGFPSFNTLLRSLRGQLYGVPRYLLTHTTLSEKKLVKKSQVMTEYNDSDLTDTQAVCTWD
QVKKSQVMRECNRL
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggccgattcagatcgggacagaggtggtcggagacgcagacatcgagggaggcgaagg
gaacgcccaggggaaagagaggtagatgaaggttcagttgtctcggtaactactcctagc
aaaccgccgatcattttggccaagcctccgagtgagcggggtctggatgattctccctct
tctggatcaagtactctgtcatcctccatgatgaccacaacccacagatctgcagacaaa
cctgttgtcatgctgaggtcacgtgacgaaggacgctccatgccctctgccaaccttccc
agcattcccagtgcactgttgtcaggagagatgcatgttggccaaggttaccatggccat
ccaaggtcggtgatctccgggcatcccactgtcagagaaggagcacaatcaagccggcct
ctgaacctcccggacgtacaaggctctgtgaaactggtggatgagaactggcagtggtgt
gataaaggcatggagatgctcctggatcaaacagattacttggtggttggtgttgtgggc
ttgcaaggggtggggaaatctacactcctctctcttcttgtggggaattctacatctgac
tctcccaggtcatttacatttcctcctgagagtaaggatggacgtgaaaatggatgtcat
cagactagaggtattgacatgtatgtgacaggggagagaatcatctacctggacacacag
cctgtgttgagtgcctccgtaatggatcatctgatccatcatgaaaagaaatacccgaca
gaattcactagcgtggagaattgtgttcacatgcagtcattacagctggccgccttcctg
atgacagtgtgcaatgtggtccttgtggtacaggattggtttgcagatctcaacttcctc
aggtttctcctaacagccgagatgctgaagccagcctccccatcaggcagcagccaggag
tctgggtctaaccctgaggattctgacgactaccacccccacctggtgtttgtacagaac
caagcttccagggaggactttagcatggacacattcaggtcttatcaacagacattaagc
atgctgttcagggactctaagcttcgctgtaaaggttccttgacactggctaatggctct
gtgatctcaggacttaacaggaaaaccattcggtcagatgtgaacctgtttctcctgcca
tcatatgatacagccacctcctttgacagagatagcatactgactctgctgccagagtac
agagggttccccagcttcaacactctgctcaggtcgctcagaggacagttgtatggagtc
ccacgctaccttctgacacacacaactctgtctgagaaaaaactggtgaagaaatcccag
gtgatgacagagtataacgactctgatcttactgacacacaggctgtctgtacatgggac
caggtgaagaaatcccaggtgatgagggaatgtaacagactgtga
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