Liolophura japonica (common chiton): 135466383
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Entry
135466383 CDS
T09976
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
ljp
Liolophura japonica (common chiton)
Brite
KEGG Orthology (KO) [BR:
ljp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ljp03041
]
135466383
Spliceosome [BR:
ljp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
135466383
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_2
TPR_16
ANAPC8
PPTA
T7SS_EccA1_N
Motif
Other DBs
NCBI-GeneID:
135466383
NCBI-ProteinID:
XP_064599898
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All DBs
Position
6:complement(2891427..2906821)
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AA seq
638 aa
AA seq
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MADTEQESATDNEKSNPEEPKQSTELEKYWKAVKDNPSDFTGWTYLLQYVEQENKGESAR
EAFDEFFSHYPYCFGYWKKYADLEKRLEEFDKAEEVFERGLKAIPLSVELWLHYLCFLTE
KHVNDPEAVGKIRSLYTRALATAGKDFRSDKLWDSFIKWEKDQNELVKVTALYDQLLSIP
TQLYSHHFDNFKLHVESNHPKDILTLDEFLKLRQEVVSSASSTPALDGVEEEEAPPGVDD
GPPGVDDAPPGLDSSKVTDAELPALRAKIIETRQAVHKLTEEEVSKRWAFEEAIKRPYFH
VKPLERAQLKNWREYLDFEIENGCNERVVVLFERCMIACALYEDFWLKYARYLEPHSVEA
VKNVYRRACKIHLPKKPNIHLAWAAFEEKQGNHDEAWEILSSLEKTLPKLAMVRLRRISL
ERRRGNYPEVEQIYRESIEEAPSLEVHSFFALKYARYLSKVLGKVEKAKEVLNKAVEKDK
KNTKLYLQLIDTEYQCQPLREERIIEILDIVINNDDIPLSTRVNFSQRKLEFMEDFGNDI
IKLSETYEHHQKLLKEYHSQKKRKQEENTEGEPNAKKAKEDYSGSNGTSASHHVTSAGDT
QQQQHHNYAYSHWPGYTNPGYGYQHSHWGAYNASYYPS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggctgacacagagcaggagagtgctacagacaacgaaaaatcaaatccggaggagcct
aaacaaagcactgaactagaaaaatactggaaggctgtgaaagacaatccatctgacttt
actggctggacataccttttgcaatatgtagaacaagagaacaaaggggagtctgcacga
gaagcctttgatgaattcttcagtcattacccgtattgttttggctactggaagaagtat
gctgacctggagaagaggttggaggagtttgacaaggccgaagaggtgttcgagcgtggt
ctgaaggccatccctctcagtgtggaactgtggctccactacctttgctttctcactgaa
aaacatgtcaacgacccggaagctgtgggcaaaataagatctttatacactagagctctg
gcaacagccggaaaggacttccgctctgacaagttgtgggactcattcatcaagtgggag
aaggaccagaatgagttggtcaaagttaccgccttgtatgatcagcttctgtccatcccc
acacagctctacagccaccattttgacaattttaagttgcacgttgagagtaatcacccc
aaagacatcctgaccctggatgagttcctaaagctaaggcaggaggtggtgtcgtcggca
tcgtctacgccagctctcgatggggtggaggaggaggaggccccaccaggggtagacgat
gggcctccaggagtggatgacgccccaccagggctcgacagtagcaaggtgactgatgca
gagctgccggcactgagggctaagatcatagagactcgtcaggctgtccacaagttgaca
gaagaggaagtcagcaagagatgggcatttgaggaggctattaaaagaccatacttccat
gtcaagccgttggagagagcccagctgaagaactggcgcgaatacctggactttgagata
gagaatggctgtaatgagcgggtggtagttctgtttgagaggtgtatgatcgcctgtgct
ctttatgaggacttttggctaaagtatgccaggtacttagagccacacagtgtagaggct
gtgaagaatgtgtataggagggcctgcaaaatacaccttcctaaaaaacctaatattcat
ctggcatgggcagcctttgaagagaagcaaggaaatcatgatgaagcttgggagatcttg
tcaagtttagagaagaccttacccaagcttgccatggtacggttacggagaattagtctg
gagagacgcagagggaattaccctgaagtggaacagatatacagggagtctatagaagag
gccccctctttagaagttcactcattcttcgctttaaaatatgctagatacctcagtaag
gtcttaggaaaggtggagaaagccaaagaagttttgaacaaagctgtggaaaaagacaag
aagaatacaaagttgtatctgcagttgatagacacagagtaccagtgtcagccactgagg
gaagaaagaatcatagagattctggacattgtgatcaacaacgacgacattccattgagc
actagggtcaacttttctcagagaaagctggaatttatggaagactttggtaacgatatt
atcaaattaagtgaaacctacgaacaccatcaaaaattattaaaagagtatcattcacaa
aagaagcgaaaacaagaggagaatactgaaggagaacctaatgctaagaaagcaaaggag
gattacagtggttccaacggaactagcgcctctcatcatgtgaccagtgcaggagacaca
cagcagcagcagcatcataactacgcttactcacactggccggggtatacgaatccaggg
tatggctatcaacactctcactggggagcttacaacgccagttactacccttcctga
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